At02164441_g1 Best Coverage

• Gene Symbol: LSD1
• Gene Name:
• Gene Aliases: AT4G20380, F9F13.30, F9F13_30, LESION SIMULATING DISEASE, LESION SIMULATING DISEASE 1
• Chromosome Location: Chr.4: 11004503 - 11006968 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LSD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001036601.1	NP_001031678.1	6 - 7	609		71
	NM_001036602.2	NP_001031679.1	6 - 7	626		71
	NM_001036603.2	NP_001031680.2	6 - 7	709		71
	NM_001084944.2	NP_001078413.1	5 - 6	801		71
	NM_001160785.1	NP_001154257.1	8 - 9	784		71
	NM_001341436.1	NP_001328264.1	5 - 6	820		71
	NM_118157.5	NP_567599.3	6 - 7	677		71
	NM_179217.4	NP_849548.1	6 - 7	720		71
	NM_179218.4	NP_849549.1	6 - 7	753		71
GenBank mRNA	AY080824.1	-	6 - 7	628		71
	AY087794.1	-	6 - 7	706		71
	AY117316.1	-	4 - 5	441		71
	U87833.1	-	6 - 7	667		71

More Information

• Set Membership: Amplicon length between 71 and 85, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Gene Ontology Categories:

Process(es)

response to superoxide
response to hypoxia
response to molecule of oomycetes origin
cell death
response to cold
plant-type hypersensitive response
systemic acquired resistance, salicylic acid mediated signaling pathway
regulation of ethylene-activated signaling pathway
regulation of hydrogen peroxide metabolic process
regulation of 1-aminocyclopropane-1-carboxylate metabolic process
aerenchyma formation
regulation of programmed cell death
negative regulation of programmed cell death

Function(s)

DNA-binding transcription factor activity
protein binding