At02178143_g1

• Gene Symbol: PIL5
• Gene Name: phytochrome interacting factor 3-like 5
• Gene Aliases: AT2G20180, PHY-INTERACTING FACTOR 1, PIF1, T2G17.2, T2G17_2, phytochrome interacting factor 3-like 5
• Chromosome Location: Chr.2: 8704024 - 8707009 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PIL5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001202630.2	NP_001189559.1	6 - 7	1242		100
	NM_001335663.1	NP_001318252.1	6 - 7	1237		100
	NM_001335664.1	NP_001323902.1	5 - 6	1369		100
	NM_001335665.1	NP_001323903.1	5 - 6	1332		100
	NM_001335666.1	NP_001323904.1	5 - 6	1473		100
	NM_001335667.1	NP_001323905.1	5 - 6	1436		100
	NM_179665.3	NP_849996.1	6 - 7	1200		100
GenBank mRNA	AF488560.2	-	5 - 6	1007		100
	BT029775.1	-	4 - 5	794		100

More Information

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Arabidopsis thaliana, Probe spans exons

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
heme biosynthetic process
gibberellic acid mediated signaling pathway
negative gravitropism
regulation of seed germination
regulation of photomorphogenesis
negative regulation of photomorphogenesis
red light signaling pathway
negative regulation of seed germination
chlorophyll biosynthetic process

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
phytochrome binding
identical protein binding
protein dimerization activity