At02201436_g1 Best Coverage

• Gene Symbol: ATMS1
• Gene Name: Cobalamin-independent synthase family protein
• Gene Aliases: AT5G17920, ATCIMS, ATMETS, COBALAMIN-INDEPENDENT METHIONINE SYNTHASE, MPI7.60, MPI7_60, methionine synthesis 1
• Chromosome Location: Chr.5: 5935038 - 5939865 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ATMS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001085130.2	NP_001078599.1	6 - 7	1346		69
	NM_121798.4	NP_197294.1	6 - 7	1300		69
GenBank mRNA	AF370522.1	-	6 - 7	1201		69
	AY048201.1	-	6 - 7	1201		69
	AY056098.1	-	6 - 7	1201		69
	AY057499.1	-	6 - 7	1201		69
	AY069876.1	-	6 - 7	1201		69
	AY070771.1	-	6 - 7	1201		69
	AY091692.1	-	5 - 6	1119		69
	U97200.1	-	5 - 6	1127		69

More Information

• Set Membership: Amplicon length less than or equal to 70, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Panther Classification:

Molecular Function -

methyltransferase

Gene Ontology Categories:

Process(es)

methylation-dependent chromatin silencing
methionine biosynthetic process
response to zinc ion
response to cadmium ion
positive regulation of histone H3-K9 methylation

Function(s)

mRNA binding
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
copper ion binding
protein binding
zinc ion binding
methionine synthase activity