At02212421_g1 Best Coverage

• Gene Symbol: XRN4
• Gene Name: exoribonuclease 4
• Gene Aliases: 5'-3' EXORIBONUCLEASE, ACC INSENSITIVE 1, AIN1, AT1G54490, ATXRN4, EIN5, ETHYLENE INSENSITIVE 5, EXORIBONUCLEASE 4, F20D21.30, F20D21_30, exoribonuclease 4
• Chromosome Location: Chr.1: 20350109 - 20356916 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: XRN4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001333652.1	NP_001321327.1	21 - 22	2608		58
	NM_104327.4	NP_175851.1	21 - 22	2403		58
GenBank mRNA	AF286718.1	-	21 - 22	2322		58
	AY064012.1	-	21 - 22	2319		58
	AY091411.1	-	21 - 22	2212		58
	BT026022.1	-	21 - 22	2298		58

More Information

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Panther Classification:

Molecular Function -

exoribonuclease

Gene Ontology Categories:

Process(es)

nuclear-transcribed mRNA catabolic process, exonucleolytic
nuclear-transcribed mRNA catabolic process
mRNA catabolic process
gravitropism
response to ethylene
unidimensional cell growth
ethylene-activated signaling pathway
response to 1-aminocyclopropane-1-carboxylic acid
phloem or xylem histogenesis
heat acclimation
miRNA catabolic process
deadenylation-independent decapping of nuclear-transcribed mRNA
regulation of gene expression, epigenetic
cell division
positive regulation of mRNA catabolic process
cellular heat acclimation

Function(s)

nucleic acid binding
RNA binding
mRNA binding
5'-3' exoribonuclease activity
protein binding
zinc ion binding