At02250630_g1 Best Coverage

• Gene Symbol: BBD1
• Gene Name: bifunctional nuclease in basal defense response 1
• Gene Aliases: AT1G75380, ATBBD1, F1B16.9, F1B16_9, bifunctional nuclease in basal defense response 1
• Chromosome Location: Chr.1: 28281195 - 28284168 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: BBD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001334685.1	NP_001322708.1	6 - 7	926		88
	NM_106192.3	NP_177671.1	6 - 7	803		88
	NM_179559.3	NP_849890.1	6 - 7	926		88
	NM_179560.3	NP_849891.1	6 - 7	790		88
GenBank mRNA	AY054232.1	-	6 - 7	795		88
	AY066045.1	-	5 - 6	631		88
	AY087417.1	-	6 - 7	800		88

More Information

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein ubiquitination
regulation of histone deacetylation
negative regulation of transcription, DNA-templated
defense response to fungus

Function(s)

nuclease activity
sequence-specific DNA binding