At02251803_g1 Best Coverage

• Gene Symbol: HDT4
• Gene Name:
• Gene Aliases: AT2G27840, F15K20.6, F15K20_6, HD2D, HDA13, HDT04, HISTONE DEACETYLASE, HISTONE DEACETYLASE 13, histone deacetylase 2D
• Chromosome Location: Chr.2: 11861806 - 11863908 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HDT4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001336129.1	NP_001318300.1	2 - 3	172		123
	NM_001336130.1	NP_001324791.1	2 - 3	145		123
	NM_128344.4	NP_565661.2	2 - 3	360		123
	NM_179778.1	NP_850109.1	1 - 2	82		123
GenBank mRNA	AF255713.1	-	1 - 2	81		123
	AK229619.1	-	2 - 3	145		123
	BT006162.1	-	2 - 3	145		123
	BT008535.1	-	1 - 2	81		123

More Information

Additional Information:

This assay is in the 5'UTR region of the NM_179778.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Gene Ontology Categories:

Process(es)

seed dormancy process
production of siRNA involved in RNA interference
negative regulation of transcription, DNA-templated

Function(s)

histone deacetylase activity