At02261281_g1 Best Coverage

• Gene Symbol: POM1
• Gene Name: Chitinase family protein
• Gene Aliases: AT1G05850, ATCTL1, CHITINASE-LIKE PROTEIN 1, CTL1, ECTOPIC DEPOSITION OF LIGNIN IN PITH, ECTOPIC DEPOSITION OF LIGNIN IN PITH 1, ECTOPIC ROOT HAIR 2, ELP, ELP1, ERH2, HOT2, POM-POM1, SENSITIVE TO HOT TEMPERATURES 2, T20M3.12, T20M3_12
• Chromosome Location: Chr.1: 1766503 - 1768837 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: POM1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001331589.1	NP_001321426.1	3 - 4	1154		52
	NM_100466.5	NP_172076.1	3 - 4	869		52
GenBank mRNA	AF332458.1	-	2 - 3	545		52
	AF422178.1	-	2 - 3	579		52
	AY034935.1	-	3 - 4	695		52
	AY113925.1	-	2 - 3	545		52

More Information

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Gene Ontology Categories:

Process(es)

cell fate specification
chitin catabolic process
response to heat
response to water deprivation
response to salt stress
response to cytokinin
lignin biosynthetic process
multidimensional cell growth
root epidermal cell differentiation
response to nitrate
regulation of salicylic acid metabolic process
cell wall macromolecule catabolic process
cellulose biosynthetic process
regulation of carbohydrate biosynthetic process

Function(s)

chitinase activity
polysaccharide binding