At02311589_m1 Best Coverage

• Gene Symbol: AT5G35910
• Gene Name: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein
• Gene Aliases: AT5G35910, MIK22.22, MIK22_22
• Chromosome Location: Chr.5: 14029574 - 14035493 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: AT5G35910
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_122982.4	NP_198440.2	7 - 8	1425		119
GenBank mRNA	EU240663.1	-	7 - 8	1421		119

More Information

• Set Membership: Amplicon length greater than or equal to 101, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Gene Ontology Categories:

Process(es)

exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
rRNA processing
polyadenylation-dependent RNA catabolic process
nuclear polyadenylation-dependent rRNA catabolic process
nuclear polyadenylation-dependent snoRNA catabolic process
nuclear polyadenylation-dependent snRNA catabolic process
nuclear polyadenylation-dependent tRNA catabolic process
nuclear polyadenylation-dependent CUT catabolic process
nuclear polyadenylation-dependent antisense transcript catabolic process
histone mRNA catabolic process
nuclear retention of unspliced pre-mRNA at the site of transcription
polyadenylation-dependent snoRNA 3'-end processing
RNA-directed DNA methylation
positive regulation of histone H3-K27 trimethylation

Function(s)

nucleotide binding
3'-5'-exoribonuclease activity
single-stranded RNA binding