At02326645_s1 Best Coverage

• Gene Symbol: AT2G42940
• Gene Name: Putative AT-hook DNA-binding family protein
• Gene Aliases: AHL16, AT-hook motif nuclear-localized protein 16, AT2G42940, F23E6.8, F23E6_8, TEK, TRANSPOSABLE ELEMENT SILENCING VIA AT-HOOK
• Chromosome Location: Chr.2: 17862254 - 17863456 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: AT2G42940
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_129855.3	NP_181822.1	1	1066		153
GenBank mRNA	BT010721.1	-	1	1023		153

More Information

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

pollen wall assembly
vegetative to reproductive phase transition of meristem
negative regulation of transposition
negative regulation of histone acetylation
positive regulation of histone H3-K9 dimethylation

Function(s)

minor groove of adenine-thymine-rich DNA binding
DNA-binding transcription factor activity
protein binding
chromatin DNA binding