Dr03114208_g1

Gene Symbol:

ewsr1b LOC110438494 LOC110440168 clpxb

Gene Name:

EWS RNA-binding protein 1b

RNA-binding protein EWS-like

RNA-binding protein FUS-like

caseinolytic mitochondrial matrix peptidase chaperone subunit Xb

Gene Aliases:

fb40b11, fusl, wu:fb40b11, wu:fb75g09, zgc:55864

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fc31b05, fj85g10, wu:fc31b05, wu:fj85g10

Chromosome Location:

Chr.5: 24873560 - 24882357 on Build GRCz11

Chromosome Location:

Chr.Unknown: 5098 - 7426 on Build GRCz11

Chromosome Location:

Chr.13: 135271 - 179227 on Build GRCz11

Chromosome Location:

Chr.25: 35574757 - 35599792 on Build GRCz11

Species:

Zebrafish

Species Specific ID (Flybase ID):

-

-

-

-

Assay Details

Gene Symbol: ewsr1b
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_212630.1	NP_997795.1	11 - 12	1179		75
	XM_005165107.2	XP_005165164.2	11 - 12	1166		75
	XM_005165108.2	XP_005165165.2	11 - 12	1138		75
	XM_009301286.1	XP_009299561.1	10 - 11	1134		75
	XM_009301287.1	XP_009299562.1	10 - 11	1128		75
GenBank mRNA	BC044518.1	-	11 - 12	1179		75
	BC067661.1	-	10 - 11	1133		75
	BC097019.1	-	11 - 12	1172		75

Gene Symbol: LOC110438494
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_021471017.1	XP_021326692.1	4 - 5	445		75

Gene Symbol: LOC110440168
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_021480686.1	XP_021336361.1	14 - 15	1567		75
	XM_021480687.1	XP_021336362.1	14 - 15	1561		75
	XM_021480688.1	XP_021336363.1	14 - 15	1540		75
	XM_021480689.1	XP_021336364.1	13 - 14	1408		75
	XM_021480691.1	XP_021336366.1	13 - 14	1446		75
	XM_021480692.1	XP_021336367.1	13 - 14	1342		75
	XM_021480693.1	XP_021336368.1	13 - 14	1315		75
	XM_021480694.1	XP_021336369.1	11 - 12	1144		75
	XM_021480695.1	XP_021336370.1	11 - 12	1138		75
	XM_021480696.1	XP_021336371.1	8 - 9	733		75

Gene Symbol: clpxb
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	AI545751.1	-	2 - 3	233		75

More Information

• Set Membership: Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Danio rerio, Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

mitotic cell cycle
regulation of transcription, DNA-templated
central nervous system neuron development

Function(s)

nucleic acid binding
transcription cofactor activity
RNA binding
metal ion binding