Gg07162766_s1 Best Coverage

• Gene Symbol: SIX3
• Gene Name: SIX homeobox 3
• Gene Aliases: CSIX3
• Chromosome Location: Chr.3: 25943217 - 25946344 on Build GRCg6a
• Species: Chicken
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SIX3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_204364.2	NP_989695.1	2	1120		82
GenBank mRNA	AY373324.1	-	2	944		82

More Information

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Recommended Assay, Gallus gallus, Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

homeodomain transcription factor

Gene Ontology Categories:

Process(es)

eye development
epithelial cell maturation
lens development in camera-type eye
optic vesicle morphogenesis
protein import into nucleus
brain development
proximal/distal axis specification
neuroblast differentiation
telencephalon development
forebrain anterior/posterior pattern specification
forebrain dorsal/ventral pattern formation
cell proliferation in forebrain
telencephalon regionalization
pituitary gland development
negative regulation of Wnt signaling pathway
regulation of cell proliferation
negative regulation of neuron differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
circadian behavior
anatomical structure development
lens induction in camera-type eye
regulation of neural retina development
lens fiber cell differentiation
neuroblast migration
regulation of cell cycle phase transition
regulation of neuroblast proliferation
apoptotic process involved in development
lens fiber cell apoptotic process
regulation of neural precursor cell proliferation

Function(s)

transcription regulatory region sequence-specific DNA binding
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcription corepressor binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
transcription coactivator activity
histone deacetylase binding