Assay Details

Gene Symbol: CCR5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000579.3	NP_000570.1	2 - 3	345		98
RefSeq	NM_001100168.1	NP_001093638.1	2 - 3	110		98
GenBank mRNA	AK292132.1	-	1 - 2	42		98
	AK314882.1	-	1 - 2	134		98
	BC038398.1	-	1 - 2	31	5186388	98
	DA818906.1	-	1 - 2	134		98
	U54994.1	-	1 - 2	42		98

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300007257.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000256.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK292132.1,BC038398.1,NM_000579.3,NM_001100168.1,U54994.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

G-protein coupled receptor

Immune Tolerance Network

Mammalian Gene Collection

Homo sapiens

Human Immune Response

Human Apoptotic Pathways triggered by HIV1

HUMAN PI3K SIGNALING

Inventoried

Human_Immune

Human_Apoptotic_Pathways_Triggered_by_HIV1

Human_PI3K_Signaling

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CCR5

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03005200.hg.1	TC03000256.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03005200.hg.1	ENST00000343801.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005200.hg.1	ENST00000400886.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005200.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03005199.hg.1	TC03000256.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03005199.hg.1	ENST00000343801.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005199.hg.1	ENST00000400886.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005199.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03005199.hg.1	NM_001100168.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03005201.hg.1	TC03000256.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03005201.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005201.hg.1	ENST00000343801.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005201.hg.1	ENST00000400886.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005201.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03005203.hg.1	TC03000256.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03005203.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005203.hg.1	ENST00000343801.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005203.hg.1	ENST00000400886.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005203.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03005203.hg.1	NM_001100168.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03005206.hg.1	TC03000256.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03005206.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005206.hg.1	ENST00000343801.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005206.hg.1	ENST00000400886.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005206.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03005206.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03005206.hg.1	NM_001100168.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300151418.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151418.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300151418.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151418.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300151418.hg.1	TC0300007257.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300151420.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300151420.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151420.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300151420.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151420.hg.1	TC0300007257.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300151422.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300151422.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151422.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300151422.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300151422.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151422.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300151422.hg.1	TC0300007257.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300151425.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300151425.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300151425.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151425.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300151425.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0300151425.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300151425.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151425.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300151425.hg.1	TC0300007257.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300151419.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151419.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300151419.hg.1	TC0300007257.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000292303.4	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	ENST00000445772.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_000579.3	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_001100168.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007257.hg.1	NM_001100168.1	Refseq

Citations (1)

Susceptibility of human testis to human immunodeficiency virus-1 infection in situ and in vitro.

Authors: Roulet V, Satie AP, Ruffault A, Le Tortorec A, Denis H, Guist'hau O, Patard JJ, Rioux-Leclerq N, Gicquel J, Jegou B, Dejucq-Rainsford N
Journal: Am J Pathol - Page No 2094 (Fri Dec 01 00:00:00 EST 2006)
Volume (Year): 169 (2006)
Product Usage: -

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