Hs00161904_m1 Best Coverage

• Gene Symbol: SNAI2
• Gene Name: snail family transcriptional repressor 2
• Gene Aliases: SLUG, SLUGH1, SNAIL2, WS2D
• Chromosome Location: Chr.8: 48917677 - 48921440 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SNAI2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_003068.4	NP_003059.1	1 - 2	254		79
GenBank mRNA	AK223368.1	-	1 - 2	243		79
	AK312661.1	-	1 - 2	243		79
	BC014890.1	-	1 - 2	231	3908245	79
	BC015895.1	-	1 - 2	211	3911047	79
	DA522147.1	-	1 - 2	255		79

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800010382.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08001199.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Homo sapiens, HUMAN ILK SIGNALING, Inventoried, Human_ILK_Signaling, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SNAI2

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
osteoblast differentiation
epithelial to mesenchymal transition
epithelial to mesenchymal transition involved in endocardial cushion formation
cell migration involved in endocardial cushion formation
transcription, DNA-templated
negative regulation of cell adhesion involved in substrate-bound cell migration
Notch signaling pathway
sensory perception of sound
negative regulation of keratinocyte proliferation
negative regulation of vitamin D biosynthetic process
neural crest cell development
positive regulation of cell migration
negative regulation of chondrocyte differentiation
regulation of chemokine production
negative regulation of cell adhesion mediated by integrin
positive regulation of histone acetylation
negative regulation of catenin import into nucleus
desmosome disassembly
pigmentation
negative regulation of DNA damage response, signal transduction by p53 class mediator
cellular response to fibroblast growth factor stimulus
positive regulation of fat cell differentiation
regulation of osteoblast differentiation
white fat cell differentiation
palate development
canonical Wnt signaling pathway
epithelium development
cartilage morphogenesis
regulation of branching involved in salivary gland morphogenesis
negative regulation of vitamin D receptor signaling pathway
cellular response to epidermal growth factor stimulus
cellular response to ionizing radiation
negative regulation of canonical Wnt signaling pathway
negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
negative regulation of stem cell proliferation
regulation of bicellular tight junction assembly
negative regulation of anoikis
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Function(s)

transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
chromatin binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
sequence-specific DNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR08015437.hg.1	TC08001199.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08015437.hg.1	ENST00000020945.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08015437.hg.1	ENST00000396822.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08015437.hg.1	NM_003068.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08015438.hg.1	TC08001199.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08015438.hg.1	ENST00000020945.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08015438.hg.1	ENST00000396822.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08015438.hg.1	NM_003068.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800170553.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170553.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170553.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800170553.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170553.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170553.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800170553.hg.1	TC0800010382.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800170552.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170552.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170552.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800170552.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170552.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170552.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800170552.hg.1	TC0800010382.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	TC0800010382.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800170554.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170554.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170554.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800170554.hg.1	ENST00000020945.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170554.hg.1	ENST00000396822.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800170554.hg.1	NM_003068.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800170554.hg.1	TC0800010382.hg.1	Clariom D TC