Hs00162006_m1

• Gene Symbol: SMPD2
• Gene Name: sphingomyelin phosphodiesterase 2
• Gene Aliases: ISC1, NSMASE, NSMASE1
• Chromosome Location: Chr.6: 109440646 - 109443922 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SMPD2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_003080.2	NP_003071.2	3 - 4	619		71
GenBank mRNA	AJ222801.1	-	3 - 4	584		71
	AK313515.1	-	3 - 4	619		71
	BC000038.2	-	3 - 4	491	3509845	71

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600009094.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000876.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Human NGF Pathway, Inventoried, Human_NGF_Pathway, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SMPD2

Gene Ontology Categories:

Process(es)

sphingomyelin metabolic process
glycosphingolipid metabolic process
response to mechanical stimulus
intracellular signal transduction
ceramide biosynthetic process
positive regulation of ceramide biosynthetic process

Function(s)

sphingomyelin phosphodiesterase activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06010337.hg.1	ENST00000258052.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010337.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010337.hg.1	TC06000876.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010336.hg.1	ENST00000258052.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010336.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010336.hg.1	TC06000876.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	ENST00000458487.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	TC0600009094.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600162507.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600162507.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600162507.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600162507.hg.1	TC0600009094.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600162507.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600162507.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600162507.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600162503.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600162503.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600162503.hg.1	NM_003080.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600162503.hg.1	TC0600009094.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600162503.hg.1	ENST00000258052.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600162503.hg.1	ENST00000439615.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600162503.hg.1	NM_003080.2	Refseq