Assay Details
Gene Symbol: COL1A1 | ||||||
---|---|---|---|---|---|---|
Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
RefSeq | NM_000088.3 | NP_000079.2 | 1 - 2 | 230 | 66 | |
XM_005257058.3 | XP_005257115.2 | 1 - 2 | 239 | 66 | ||
XM_005257059.4 | XP_005257116.2 | 1 - 2 | 239 | 66 | ||
XM_011524341.1 | XP_011522643.1 | 1 - 2 | 239 | 66 | ||
GenBank mRNA | AB209597.1 | - | 1 - 2 | 205 | 66 | |
BC036531.2 | - | 1 - 2 | 220 | 5264710 | 66 | |
JQ236861.1 | - | 1 - 2 | 104 | 66 | ||
M36546.1 | - | 1 - 2 | 187 | 66 | ||
X07884.1 | - | 1 - 2 | 187 | 66 | ||
Z74615.1 | - | 1 - 2 | 223 | 66 |

More Information
Updated Mapping Information

This assay targets the same location as HTA transcript cluster(s) TC17001682.hg.1
Set Membership: |
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Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
MicroArray Probes:

Citations (56)
Gene profiling of scleroderma skin reveals robust signatures of disease that are imperfectly reflected in the transcript profiles of explanted fibroblasts.
- Authors
- Gardner H, Shearstone JR, Bandaru R, Crowell T, Lynes M, Trojanowska M, Pannu J, Smith E, Jablonska S, Blaszczyk M, Tan FK, Mayes MD
- Journal
- Arthritis Rheum - Page No 1961 (Thu Jun 01 00:00:00 EDT 2006)
- Volume (Year)
- 54 (2006)
- Product Usage
- -
Osteogenic differentiation of human umbilical cord mesenchymal stromal cells in polyglycolic acid scaffolds.
- Authors
- Wang L, Dormer NH, Bonewald LF, Detamore MS
- Journal
- Tissue Eng Part A - Page No 1937 (Tue Jun 01 00:00:00 EDT 2010)
- Volume (Year)
- 16 (2010)
- Product Usage
- -
MCP-1/CCR2-dependent loop for fibrogenesis in human peripheral CD14-positive monocytes.
- Authors
- Sakai N, Wada T, Furuichi K, Shimizu K, Kokubo S, Hara A, Yamahana J, Okumura T, Matsushima K, Yokoyama H, Kaneko S
- Journal
- J Leukoc Biol - Page No 555 (Wed Mar 01 00:00:00 EST 2006)
- Volume (Year)
- 79 (2006)
- Product Usage
- -
Effects of synovial fluid from aseptic prosthesis loosening on collagen production in osteoblasts.
- Authors
- Tsai JA, Andersson MK, Ivarsson M, Granberg B, Stark A
- Journal
- Int Orthop - Page No 873 (Mon Jun 01 00:00:00 EDT 2009)
- Volume (Year)
- 33 (2009)
- Product Usage
- -
Potent induction of chondrocytic differentiation of human adipose-derived adult stem cells by bone morphogenetic protein 6.
- Authors
- Estes BT, Wu AW, Guilak F
- Journal
- Arthritis Rheum - Page No 1222 (Sat Apr 01 00:00:00 EST 2006)
- Volume (Year)
- 54 (2006)
- Product Usage
- -
Intervention in growth factor activated signaling pathways by renally targeted kinase inhibitors.
- Authors
- Fretz MM, Dolman ME, Lacombe M, Prakash J, Nguyen TQ, Goldschmeding R, Pato J, Storm G, Hennink WE, Kok RJ
- Journal
- J Control Release - Page No 200 (Thu Dec 18 00:00:00 EST 2008)
- Volume (Year)
- 132 (2008)
- Product Usage
- -
Differentiation of human mesenchymal stem cells and articular chondrocytes: analysis of chondrogenic potential and expression pattern of differentiation-related transcription factors.
- Authors
- Karlsson C, Brantsing C, Svensson T, Brisby H, Asp J, Tallheden T, Lindahl A
- Journal
- J Orthop Res - Page No 152 (Thu Feb 01 00:00:00 EST 2007)
- Volume (Year)
- 25 (2007)
- Product Usage
- -
Association of an extracellular matrix gene cluster with breast cancer prognosis and endocrine therapy response.
- Authors
- Helleman J, Jansen MP, Ruigrok-Ritstier K, van Staveren IL, Look MP, Meijer-van Gelder ME, Sieuwerts AM, Klijn JG, Sleijfer S, Foekens JA, Berns EM
- Journal
- Clin Cancer Res - Page No 5555 (Mon Sep 01 00:00:00 EDT 2008)
- Volume (Year)
- 14 (2008)
- Product Usage
- -
Circulating mesenchymal stem cells with abnormal osteogenic differentiation in patients with osteoporosis.
- Authors
- Dalle Carbonare L, Valenti MT, Zanatta M, Donatelli L, Lo Cascio V
- Journal
- Arthritis Rheum - Page No 3356 (Sun Nov 01 00:00:00 EDT 2009)
- Volume (Year)
- 60 (2009)
- Product Usage
- -
Fibrin gel improved the spatial uniformity and phenotype of human chondrocytes seeded on collagen scaffolds.
- Authors
- Malicev E, Radosavljevic D, Velikonja NK
- Journal
- Biotechnol Bioeng - Page No 364 (Thu Feb 01 00:00:00 EST 2007)
- Volume (Year)
- 96 (2007)
- Product Usage
- -
Inorganic polyphosphate differentiates human mesenchymal stem cells into osteoblastic cells.
- Authors
- Morimoto D, Tomita T, Kuroda S, Higuchi C, Kato S, Shiba T, Nakagami H, Morishita R, Yoshikawa H
- Journal
- J Bone Miner Metab - Page No 418 (Thu Jul 01 00:00:00 EDT 2010)
- Volume (Year)
- 28 (2010)
- Product Usage
- -
Decreased gene expression of fibrillin-1 in stress urinary incontinence.
- Authors
- Soderberg MW, Bystrom B, Hammarstrom M, Malmstrom A, Ekman-Ordeberg G
- Journal
- Neurourol Urodyn - Page No 476 (Mon Mar 01 00:00:00 EST 2010)
- Volume (Year)
- 29 (2010)
- Product Usage
- -
Modification of silk fibroin using diazonium coupling chemistry and the effects on hMSC proliferation and differentiation.
- Authors
- Murphy AR, St John P, Kaplan DL
- Journal
- Biomaterials - Page No 2829 (Tue Jul 01 00:00:00 EDT 2008)
- Volume (Year)
- 29 (2008)
- Product Usage
- -
Thermogelling chitosan and collagen composite hydrogels initiated with beta-glycerophosphate for bone tissue engineering.
- Authors
- Wang L, Stegemann JP
- Journal
- Biomaterials - Page No 3976 (Sat May 01 00:00:00 EDT 2010)
- Volume (Year)
- 31 (2010)
- Product Usage
- -
Hyaluronic acid modulates gene expression of connective tissue growth factor (CTGF), transforming growth factor-beta1 (TGF-beta1), and vascular endothelial growth factor (VEGF) in human fibroblast-like synovial cells from advanced-stage osteoarthritis in vitro.
- Authors
- Lee YT, Shao HJ, Wang JH, Liu HC, Hou SM, Young TH
- Journal
- J Orthop Res - Page No 492 (Thu Apr 01 00:00:00 EDT 2010)
- Volume (Year)
- 28 (2010)
- Product Usage
- -
Multidifferentiation potential of mesenchymal stem cells in three-dimensional collagen gel cultures.
- Authors
- Yoneno K, Ohno S, Tanimoto K, Honda K, Tanaka N, Doi T, Kawata T, Tanaka E, Kapila S, Tanne K
- Journal
- J Biomed Mater Res A - Page No 733 (Thu Dec 01 00:00:00 EST 2005)
- Volume (Year)
- 75 (2005)
- Product Usage
- -
Human Primary Articular Chondrocytes, Chondroblasts-Like Cells, and Dedifferentiated Chondrocytes: Differences in Gene, MicroRNA, and Protein Expression and Phenotype.
- Authors
- Karlsen TA, Shahdadfar A, Brinchmann JE
- Journal
- Tissue Eng Part C Methods - Page No (Thu Oct 21 00:00:00 EDT 2010)
- Volume (Year)
- (2010)
- Product Usage
- -
Inhibition of histone deacetylase activity suppresses epithelial-to-mesenchymal transition induced by TGF-beta1 in human renal epithelial cells.
- Authors
- Yoshikawa M, Hishikawa K, Marumo T, Fujita T
- Journal
- J Am Soc Nephrol - Page No 58 (Mon Jan 01 00:00:00 EST 2007)
- Volume (Year)
- 18 (2007)
- Product Usage
- -
Effect of menopause on gene expression pattern in bone tissue of nonosteoporotic women.
- Authors
- Kosa JP, Balla B, Speer G, Kiss J, Borsy A, Podani J, Takacs I, Lazary A, Nagy Z, Bacsi K, Orosz L, Lakatos P
- Journal
- Menopause - Page No 367 (Sun Mar 01 00:00:00 EST 2009)
- Volume (Year)
- 16 (2009)
- Product Usage
- -
Adenovirus-mediated gene transfer of hIGF-IB in mouse lungs induced prolonged inflammation but no fibroproliferation.
- Authors
- Leger C, Ni A, Andonegui G, Wong J, Mowat C, Winston BW
- Journal
- Am J Physiol Lung Cell Mol Physiol - Page No L492 (Thu Apr 01 00:00:00 EDT 2010)
- Volume (Year)
- 298 (2010)
- Product Usage
- -
Chondrogenic differentiation of human bone marrow derived mesenchymal stem cells in self-gelling alginate discs reveals novel chondrogenic signature gene clusters.
- Authors
- Herlofsen SR, Kuchler AM, Melvik JE, Brinchmann JE
- Journal
- Tissue Eng Part A - Page No (Fri Nov 19 00:00:00 EST 2010)
- Volume (Year)
- (2010)
- Product Usage
- -
The differentiation of mesenchymal stem cells by mechanical stress or/and co-culture system.
- Authors
- Lee IC, Wang JH, Lee YT, Young TH
- Journal
- Biochem Biophys Res Commun - Page No 147 (Fri Jan 05 00:00:00 EST 2007)
- Volume (Year)
- 352 (2007)
- Product Usage
- -
Proliferation and differentiation potential of chondrocytes from osteoarthritic patients.
- Authors
- Tallheden T, Bengtsson C, Brantsing C, Sjogren-Jansson E, Carlsson L, Peterson L, Brittberg M, Lindahl A
- Journal
- Arthritis Res Ther - Page No R560 (Sat Jan 01 00:00:00 EST 2005)
- Volume (Year)
- 7 (2005)
- Product Usage
- -
The proliferation and differentiation of osteoblasts in co-culture with human umbilical vein endothelial cells: An improved analysis using fluorescence-activated cell sorting.
- Authors
- Zhang Y, Schedle A, Matejka M, Rausch-Fan X, Andrukhov O
- Journal
- Cell Mol Biol Lett - Page No 517 (Wed Dec 01 00:00:00 EST 2010)
- Volume (Year)
- 15 (2010)
- Product Usage
- -
Silk fibroin/hyaluronan scaffolds for human mesenchymal stem cell culture in tissue engineering.
- Authors
- Garcia-Fuentes M, Meinel AJ, Hilbe M, Meinel L, Merkle HP
- Journal
- Biomaterials - Page No 5068 (Thu Oct 01 00:00:00 EDT 2009)
- Volume (Year)
- 30 (2009)
- Product Usage
- -
Flow perfusion culture of human mesenchymal stem cells on silicate-substituted tricalcium phosphate scaffolds.
- Authors
- Bjerre L, Bunger CE, Kassem M, Mygind T
- Journal
- Biomaterials - Page No 2616 (Sun Jun 01 00:00:00 EDT 2008)
- Volume (Year)
- 29 (2008)
- Product Usage
- -
Extracellular matrix production by adipose-derived stem cells: implications for heart valve tissue engineering.
- Authors
- Colazzo F, Sarathchandra P, Smolenski RT, Chester AH, Tseng YT, Czernuszka JT, Yacoub MH, Taylor PM
- Journal
- Biomaterials - Page No 119 (Sat Jan 01 00:00:00 EST 2011)
- Volume (Year)
- 32 (2011)
- Product Usage
- -
Effects of chronic rosiglitazone therapy on gene expression in human adipose tissue in vivo in patients with type 2 diabetes.
- Authors
- Kolak M, Yki-Jarvinen H, Kannisto K, Tiikkainen M, Hamsten A, Eriksson P, Fisher RM
- Journal
- J Clin Endocrinol Metab - Page No 720 (Thu Feb 01 00:00:00 EST 2007)
- Volume (Year)
- 92 (2007)
- Product Usage
- -
Mesenchymal progenitor cell markers in human articular cartilage: normal distribution and changes in osteoarthritis.
- Authors
- Grogan SP, Miyaki S, Asahara H, D'Lima DD, Lotz MK
- Journal
- Arthritis Res Ther - Page No R85 (Thu Jan 01 00:00:00 EST 2009)
- Volume (Year)
- 11 (2009)
- Product Usage
- -
Monolayer cell expansion conditions affect the chondrogenic potential of adipose-derived stem cells.
- Authors
- Estes BT, Diekman BO, Guilak F
- Journal
- Biotechnol Bioeng - Page No 986 (Sat Mar 01 00:00:00 EST 2008)
- Volume (Year)
- 99 (2008)
- Product Usage
- -
Liver X receptor is a therapeutic target for photoaging and chronological skin aging.
- Authors
- Chang KC, Shen Q, Oh IG, Jelinsky SA, Jenkins SF, Wang W, Wang Y, LaCava M, Yudt MR, Thompson CC, Freedman LP, Chung JH, Nagpal S
- Journal
- Mol Endocrinol - Page No 2407 (Sat Nov 01 00:00:00 EDT 2008)
- Volume (Year)
- 22 (2008)
- Product Usage
- -
Human serum for culture of articular chondrocytes.
- Authors
- Tallheden T, van der Lee J, Brantsing C, Mansson JE, Sjogren-Jansson E, Lindahl A
- Journal
- Cell Transplant - Page No 469 (Sat Jan 01 00:00:00 EST 2005)
- Volume (Year)
- 14 (2005)
- Product Usage
- -
The phenotypic responses of human anterior cruciate ligament cells cultured on poly(epsilon-caprolactone) and chitosan.
- Authors
- Shao HJ, Chen CS, Lee YT, Wang JH, Young TH
- Journal
- J Biomed Mater Res A - Page No 1297 (Tue Jun 15 00:00:00 EDT 2010)
- Volume (Year)
- 93 (2010)
- Product Usage
- -
Different gene expression patterns in the bone tissue of aging postmenopausal osteoporotic and non-osteoporotic women.
- Authors
- Balla B, Kosa JP, Kiss J, Borsy A, Podani J, Takacs I, Lazary A, Nagy Z, Bacsi K, Speer G, Orosz L, Lakatos P
- Journal
- Calcif Tissue Int - Page No 12 (Tue Jan 01 00:00:00 EST 2008)
- Volume (Year)
- 82 (2008)
- Product Usage
- -
Defining long-term maintenance conditions of human embryonic stem cells with arrayed cellular microenvironment technology.
- Authors
- Brafman DA, Shah KD, Fellner T, Chien S, Willert K
- Journal
- Stem Cells Dev - Page No 1141 (Thu Oct 01 00:00:00 EDT 2009)
- Volume (Year)
- 18 (2009)
- Product Usage
- -
First look at the effect of overexpression of TIGR/MYOC on the transcriptome of the human trabecular meshwork.
- Authors
- Borras T, Bryant PA, Chisolm SS
- Journal
- Exp Eye Res - Page No 1002 (Thu Jun 01 00:00:00 EDT 2006)
- Volume (Year)
- 82 (2006)
- Product Usage
- -
Notch and HES5 are regulated during human cartilage differentiation.
- Authors
- Karlsson C, Jonsson M, Asp J, Brantsing C, Kageyama R, Lindahl A
- Journal
- Cell Tissue Res - Page No 539 (Thu Mar 01 00:00:00 EST 2007)
- Volume (Year)
- 327 (2007)
- Product Usage
- -
Dynamics of gene expression during bone matrix formation in osteogenic cultures derived from human embryonic stem cells in vitro.
- Authors
- Karner E, Backesjo CM, Cedervall J, Sugars RV, Ahrlund-Richter L, Wendel M
- Journal
- Biochim Biophys Acta - Page No 110 (Sun Feb 01 00:00:00 EST 2009)
- Volume (Year)
- 1790 (2009)
- Product Usage
- -
Molecular evidence of injury and inflammation in normal and fibrotic renal allografts one year posttransplant.
- Authors
- Park W, Griffin M, Grande JP, Cosio F, Stegall MD
- Journal
- Transplantation - Page No 1466 (Fri Jun 15 00:00:00 EDT 2007)
- Volume (Year)
- 83 (2007)
- Product Usage
- -
Mechanical properties and gene expression of chondrocytes on micropatterned substrates following dedifferentiation in monolayer.
- Authors
- Darling EM, Pritchett PE, Evans BA, Superfine R, Zauscher S, Guilak F
- Journal
- Cell Mol Bioeng - Page No 395 (Sun Aug 09 00:00:00 EDT 2009)
- Volume (Year)
- 2 (2009)
- Product Usage
- -
Effects of cyclic mechanical stretching on the mRNA expression of tendon/ligament-related and osteoblast-specific genes in human mesenchymal stem cells.
- Authors
- Chen YJ, Huang CH, Lee IC, Lee YT, Chen MH, Young TH
- Journal
- Connect Tissue Res - Page No 7 (Tue Jan 01 00:00:00 EST 2008)
- Volume (Year)
- 49 (2008)
- Product Usage
- -
The antifibrotic drug halofuginone inhibits proliferation and collagen production by human leiomyoma and myometrial smooth muscle cells.
- Authors
- Grudzien MM, Low PS, Manning PC, Arredondo M, Belton RJ Jr, Nowak RA
- Journal
- Fertil Steril - Page No 1290 (Mon Mar 01 00:00:00 EST 2010)
- Volume (Year)
- 93 (2010)
- Product Usage
- -
Cervical tissue engineering using silk scaffolds and human cervical cells.
- Authors
- House M, Sanchez CC, Rice WL, Socrate S, Kaplan DL
- Journal
- Tissue Eng Part A - Page No 2101 (Tue Jun 01 00:00:00 EDT 2010)
- Volume (Year)
- 16 (2010)
- Product Usage
- -
Induction of matrix metalloproteinase-1 by small interfering RNA targeting connective tissue growth factor in dermal fibroblasts from patients with systemic sclerosis.
- Authors
- Ishibuchi H, Abe M, Yokoyama Y, Ishikawa O
- Journal
- Exp Dermatol - Page No e111 (Sun Aug 01 00:00:00 EDT 2010)
- Volume (Year)
- 19 (2010)
- Product Usage
- -
Mesenchymal stem cell ingrowth and differentiation on coralline hydroxyapatite scaffolds.
- Authors
- Mygind T, Stiehler M, Baatrup A, Li H, Zou X, Flyvbjerg A, Kassem M, Bunger C
- Journal
- Biomaterials - Page No 1036 (Thu Feb 01 00:00:00 EST 2007)
- Volume (Year)
- 28 (2007)
- Product Usage
- -
Morphology, proliferation, and osteogenic differentiation of mesenchymal stem cells cultured on titanium, tantalum, and chromium surfaces.
- Authors
- Stiehler M, Lind M, Mygind T, Baatrup A, Dolatshahi-Pirouz A, Li H, Foss M, Besenbacher F, Kassem M, Bunger C
- Journal
- J Biomed Mater Res A - Page No 448 (Fri Aug 01 00:00:00 EDT 2008)
- Volume (Year)
- 86 (2008)
- Product Usage
- -
Effect of vertebroplasty filler materials on viability and gene expression of human nucleus pulposus cells.
- Authors
- Lazary A, Speer G, Varga PP, Balla B, Bacsi K, Kosa JP, Nagy Z, Takacs I, Lakatos P
- Journal
- J Orthop Res - Page No 601 (Thu May 01 00:00:00 EDT 2008)
- Volume (Year)
- 26 (2008)
- Product Usage
- -
Role of Smad2/3 and p38 MAP kinase in TGF-beta1-induced epithelial-mesenchymal transition of pulmonary epithelial cells.
- Authors
- Kolosova I, Nethery D, Kern JA
- Journal
- J Cell Physiol - Page No (Wed Oct 13 00:00:00 EDT 2010)
- Volume (Year)
- (2010)
- Product Usage
- -
Nickel induces intracellular calcium mobilization and pathophysiological responses in human cultured airway epithelial cells.
- Authors
- Cortijo J, Milara J, Mata M, Donet E, Gavara N, Peel SE, Hall IP, Morcillo EJ
- Journal
- Chem Biol Interact - Page No 25 (Tue Jan 05 00:00:00 EST 2010)
- Volume (Year)
- 183 (2010)
- Product Usage
- -
DNA binding-dependent glucocorticoid receptor activity promotes adipogenesis via Kruppel-like factor 15 gene expression.
- Authors
- Asada M, Rauch A, Shimizu H, Maruyama H, Miyaki S, Shibamori M, Kawasome H, Ishiyama H, Tuckermann J, Asahara H
- Journal
- Lab Invest - Page No (Mon Oct 18 00:00:00 EDT 2010)
- Volume (Year)
- (2010)
- Product Usage
- -
Modulation of gene expression and collagen production of anterior cruciate ligament cells through cell shape changes on polycaprolactone/chitosan blends.
- Authors
- Shao HJ, Lee YT, Chen CS, Wang JH, Young TH
- Journal
- Biomaterials - Page No 4695 (Tue Jun 01 00:00:00 EDT 2010)
- Volume (Year)
- 31 (2010)
- Product Usage
- -
Adenoviral gene transfer of active human transforming growth factor-{beta}2 elevates intraocular pressure and reduces outflow facility in rodent eyes.
- Authors
- Shepard AR, Millar JC, Pang IH, Jacobson N, Wang WH, Clark AF
- Journal
- Invest Ophthalmol Vis Sci - Page No 2067 (Thu Apr 01 00:00:00 EDT 2010)
- Volume (Year)
- 51 (2010)
- Product Usage
- -
Effect of dynamic 3-D culture on proliferation, distribution, and osteogenic differentiation of human mesenchymal stem cells.
- Authors
- Stiehler M, Bunger C, Baatrup A, Lind M, Kassem M, Mygind T
- Journal
- J Biomed Mater Res A - Page No 96 (Wed Apr 01 00:00:00 EDT 2009)
- Volume (Year)
- 89 (2009)
- Product Usage
- -
MicroRNA-140 is expressed in differentiated human articular chondrocytes and modulates interleukin-1 responses.
- Authors
- Miyaki S, Nakasa T, Otsuki S, Grogan SP, Higashiyama R, Inoue A, Kato Y, Sato T, Lotz MK, Asahara H
- Journal
- Arthritis Rheum - Page No 2723 (Tue Sep 01 00:00:00 EDT 2009)
- Volume (Year)
- 60 (2009)
- Product Usage
- -
DNA methylation analysis as novel tool for quality control in regenerative medicine.
- Authors
- Rapko S, Baron U, Hoffmuller U, Model F, Wolfe L, Olek S
- Journal
- Tissue Eng - Page No 2271 (Sat Sep 01 00:00:00 EDT 2007)
- Volume (Year)
- 13 (2007)
- Product Usage
- -
Human adipose-derived stem cells contribute to chondrogenesis in coculture with human articular chondrocytes.
- Authors
- Hildner F, Concaro S, Peterbauer A, Wolbank S, Danzer M, Lindahl A, Gatenholm P, Redl H, van Griensven M
- Journal
- Tissue Eng Part A - Page No 3961 (Tue Dec 01 00:00:00 EST 2009)
- Volume (Year)
- 15 (2009)
- Product Usage
- -
