Hs00173442_m1

Gene Symbol:

APOC2 APOC4-APOC2

Gene Name:

apolipoprotein C2

APOC4-APOC2 readthrough (NMD candidate)

Gene Aliases:

APO-CII, APOC-II

-

Chromosome Location:

Chr.19: 44945982 - 44949565 on Build GRCh38

Chromosome Location:

Chr.19: 44942238 - 44949565 on Build GRCh38

Species:

Human

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: APOC2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000483.4	NP_000474.2	1 - 2	99		86
GenBank mRNA	AV694494.1	-	1 - 2	95		86
	BU596546.1	-	1 - 2	135		86

Gene Symbol: APOC4-APOC2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037932.1		3 - 4	1199		86
GenBank mRNA	AK126257.1	-	4 - 5	1133		86

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1900011762.hg.1, TC1900011763.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19002642.hg.1

Additional Information:

This assay is in the 5'UTR region of the NM_000483.4 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Transporter, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene APOC2
Click here to find siRNAs for Gene APOC4-APOC2

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Process(es)

retinoid metabolic process
positive regulation of phospholipase activity
positive regulation of triglyceride catabolic process
positive regulation of very-low-density lipoprotein particle remodeling
negative regulation of very-low-density lipoprotein particle clearance
lipid catabolic process
negative regulation of cholesterol transport
cholesterol efflux
phospholipid efflux
triglyceride-rich lipoprotein particle remodeling
chylomicron remodeling
very-low-density lipoprotein particle remodeling
chylomicron remnant clearance
high-density lipoprotein particle clearance
lipoprotein metabolic process
cholesterol homeostasis
negative regulation of catalytic activity
reverse cholesterol transport
positive regulation of fatty acid biosynthetic process
negative regulation of lipid metabolic process
negative regulation of receptor-mediated endocytosis
positive regulation of lipoprotein lipase activity
positive regulation of phospholipid catabolic process
triglyceride homeostasis

Function(s)

lipid binding
phospholipase activator activity
protein homodimerization activity
phospholipase binding
lipase inhibitor activity
lipoprotein lipase activator activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR19008842.hg.1	TC19002642.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19008842.hg.1	ENST00000252490.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19008842.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19008844.hg.1	TC19002642.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19008844.hg.1	ENST00000252490.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19008844.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19008845.hg.1	TC19002642.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19008845.hg.1	ENST00000252490.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19008845.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	PSR1900201630.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201630.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201630.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900201630.hg.1	TC1900011763.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900201630.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201630.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201630.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900201606.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201606.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	PSR1900201606.hg.1	TC1900011762.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900201606.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201606.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	TC1900011762.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201614.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	PSR1900201629.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201629.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201629.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900201629.hg.1	TC1900011763.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900201629.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201629.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201629.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000585685.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	ENST00000589057.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011763.hg.1	NR_037932.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	TC1900011762.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	NM_000483.4	Refseq
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	TC1900011762.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000252490.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000585786.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000590360.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000591597.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	ENST00000592257.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900201613.hg.1	NM_000483.4	Refseq