Hs00173527_m1

• Gene Symbol: CXCR5
• Gene Name: C-X-C motif chemokine receptor 5
• Gene Aliases: BLR1, CD185, MDR15
• Chromosome Location: Chr.11: 118883766 - 118896271 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CXCR5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001716.4	NP_001707.1	1 - 2	230		73
GenBank mRNA	AK291512.1	-	1 - 2	230		73
	BC110352.1	-	1 - 2	144	5219901	73
	DA815880.1	-	1 - 2	164		73
	X68149.1	-	1 - 2	138		73

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100009225.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11001073.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, G-protein coupled receptor, Immune Tolerance Network, Mammalian Gene Collection, Homo sapiens, Human Chemokine Panel, Inventoried, Human_Chemokine, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CXCR5

Gene Ontology Categories:

Process(es)

movement of cell or subcellular component
chemotaxis
immune response
G-protein coupled receptor signaling pathway
positive regulation of cytokinesis
B cell activation
lymph node development
chemokine-mediated signaling pathway

Function(s)

G-protein coupled receptor activity
protein binding
C-X-C chemokine receptor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR11013550.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11013550.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11013550.hg.1	TC11001073.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR11013549.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11013549.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11013549.hg.1	TC11001073.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11013552.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11013552.hg.1	NM_001716.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11013552.hg.1	NM_032966.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11013552.hg.1	TC11001073.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1100168825.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168825.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100168825.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100168825.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168825.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100168825.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100168825.hg.1	TC1100009225.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	TC1100009225.hg.1	NM_032966.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100168821.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168821.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100168821.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168821.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100168821.hg.1	TC1100009225.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100168823.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168823.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100168823.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168823.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100168823.hg.1	TC1100009225.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100168822.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168822.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100168822.hg.1	ENST00000292174.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100168822.hg.1	NM_001716.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100168822.hg.1	TC1100009225.hg.1	Clariom D TC