Hs00184192_m1 Best Coverage

• Gene Symbol: TRAF2
• Gene Name: TNF receptor associated factor 2
• Gene Aliases: MGC:45012, TRAP, TRAP3
• Chromosome Location: Chr.9: 136881776 - 136926615 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TRAF2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_021138.3	NP_066961.2	6 - 7	662		72
	XM_011518973.2	XP_011517275.1	7 - 8	966		72
	XM_011518974.2	XP_011517276.1	6 - 7	1567		72
	XM_011518975.2	XP_011517277.1	7 - 8	894		72
	XM_011518976.2	XP_011517278.1	7 - 8	935		72
	XM_011518977.2	XP_011517279.1	6 - 7	655		72
	XM_011518978.2	XP_011517280.1	6 - 7	2076		72
	XM_017015094.1	XP_016870583.1	6 - 7	710		72
	XM_017015095.1	XP_016870584.1	6 - 7	1420		72
GenBank mRNA	AK289722.1	-	7 - 8	778		72
	AK294607.1	-	6 - 7	521		72
	AK298370.1	-	6 - 7	626		72
	BC032410.1	-	5 - 6	648	5216790	72
	BC033810.1	-	6 - 7	650	5182942	72
	BC043492.1	-	6 - 7	662	5767794	72
	BC064662.1	-	5 - 6	657	6528158	72
	HM991672.1	-	5 - 6	605		72

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900009242.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09000826.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Apoptosis, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Human TNFR2 Pathway, Human NGF Pathway, Human TNFR1 Pathway, Human Apoptotic Pathways triggered by HIV1, Human TNF Superfamily Pathway, Human Toll Pathway Core Components, HUMAN FAS SIGNALING, HUMAN 14-3-3 INDUCED INTRACELLULAR SIGNALING, HUMAN APOPTOSIS THROUGH DEATH RECEPTORS, HUMAN CELLULAR APOPTOSIS PATHWAY, 1700, Inventoried, MicroArray Quality Control (MAQC), Human_TNFR2_Pathway, Human_Toll_Pathway_Core_Components, Human_TNFR1_Pathway, Human_NGF_Pathway, Human_TNF_Superfamily_Pathway, Human_Apoptotic_Pathways_Triggered_by_HIV1, Human_14-3-3_Induced_Intracellular_Signaling, Human_Apoptosis_through_Death_Receptors, Human_Fas_Signaling, Human_Cellular_Apoptosis_Pathway, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TRAF2

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

positive regulation of T cell cytokine production
protein complex assembly
activation of cysteine-type endopeptidase activity involved in apoptotic process
signal transduction
I-kappaB kinase/NF-kappaB signaling
activation of NF-kappaB-inducing kinase activity
regulation of tumor necrosis factor-mediated signaling pathway
regulation of necrotic cell death
protein catabolic process
positive regulation of interleukin-2 production
tumor necrosis factor-mediated signaling pathway
negative regulation of glial cell apoptotic process
response to endoplasmic reticulum stress
regulation of apoptotic process
positive regulation of JUN kinase activity
cellular protein complex assembly
positive regulation of T cell activation
regulation of immunoglobulin secretion
positive regulation of sequence-specific DNA binding transcription factor activity
positive regulation of NF-kappaB transcription factor activity
protein heterooligomerization
protein autoubiquitination
intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
protein homotrimerization
protein K63-linked ubiquitination
death-inducing signaling complex assembly
cellular response to nitric oxide
positive regulation of protein homodimerization activity
activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
programmed necrotic cell death
negative regulation of neuron death
regulation of extrinsic apoptotic signaling pathway via death domain receptors
negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
positive regulation of tumor necrosis factor-mediated signaling pathway
positive regulation of I-kappaB phosphorylation
positive regulation of extrinsic apoptotic signaling pathway

Function(s)

ubiquitin-protein transferase activity
signal transducer activity
tumor necrosis factor receptor binding
CD40 receptor binding
protein binding
zinc ion binding
ligase activity
enzyme binding
protein kinase binding
protein phosphatase binding
mitogen-activated protein kinase kinase kinase binding
ubiquitin protein ligase binding
thioesterase binding
protein complex binding
identical protein binding
sphingolipid binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000466107.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000466107.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000466107.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09010832.hg.1	TC09000826.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09010832.hg.1	ENST00000247668.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09010832.hg.1	ENST00000359662.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09010832.hg.1	ENST00000432785.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09010832.hg.1	ENST00000482854.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09010832.hg.1	ENST00000536468.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09010832.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000414589.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000419057.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000429509.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000466107.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000466107.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000466107.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000474950.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	TC0900009242.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900163152.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900163152.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900163152.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900163152.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900163152.hg.1	ENST00000247668.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900163152.hg.1	ENST00000469701.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900163152.hg.1	ENST00000482854.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900163152.hg.1	NM_021138.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900163152.hg.1	TC0900009242.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	199702	-	-