Hs00228671_m1 Best Coverage

• Gene Symbol: PDGFD
• Gene Name: platelet derived growth factor D
• Gene Aliases: IEGF, MSTP036, SCDGF-B, SCDGFB
• Chromosome Location: Chr.11: 103907186 - 104164299 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PDGFD
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_025208.4	NP_079484.1	5 - 6	1147		73
	NM_033135.3	NP_149126.1	5 - 6	1129		73
GenBank mRNA	AB033832.1	-	5 - 6	931		73
	AF113216.1	-	5 - 6	881		73
	AF335584.1	-	5 - 6	956		73
	AF336376.1	-	5 - 6	950		73
	AK292801.1	-	5 - 6	955		73
	AY027517.1	-	5 - 6	867		73
	AY027518.1	-	5 - 6	849		73
	AY359116.1	-	5 - 6	788		73
	BC030645.2	-	5 - 6	1209	4824526	73

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100012155.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11002242.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Human PDGF Pathway, 1700, Inventoried, Human_PDGF_Pathway, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PDGFD

Panther Classification:

Molecular Function -

growth factor

Gene Ontology Categories:

Process(es)

multicellular organism development
blood coagulation
positive regulation of cell proliferation
positive regulation of phosphatidylinositol 3-kinase signaling
positive regulation of cell migration
positive regulation of protein autophosphorylation
cellular response to platelet-derived growth factor stimulus
positive regulation of MAP kinase activity
platelet-derived growth factor receptor signaling pathway
positive regulation of fibroblast proliferation
positive regulation of smooth muscle cell proliferation
regulation of peptidyl-tyrosine phosphorylation
positive regulation of cell division
cellular response to hydrogen peroxide
positive regulation of ERK1 and ERK2 cascade
cellular response to amino acid stimulus
cellular response to transforming growth factor beta stimulus
positive regulation of smooth muscle cell chemotaxis
positive regulation of glomerular mesangial cell proliferation
positive regulation of monocyte extravasation

Function(s)

platelet-derived growth factor receptor binding
growth factor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR11026793.hg.1	ENST00000302251.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11026793.hg.1	ENST00000393158.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11026793.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11026793.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11026793.hg.1	TC11002242.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000529268.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000529268.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000529268.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	ENST00000529268.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	PSR1100193420.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193420.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193420.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193420.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	PSR1100193420.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193420.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100193420.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	PSR1100193420.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	PSR1100193420.hg.1	TC1100012155.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000302251.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000393158.6	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000529268.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000529268.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000529268.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	ENST00000529268.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_025208.4	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq
Affymetrix Human Clariom D Assay	TC1100012155.hg.1	NM_033135.3	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	108301	-	-