Hs00231914_m1 Best Coverage

• Gene Symbol: SIM1
• Gene Name: single-minded family bHLH transcription factor 1
• Gene Aliases: bHLHe14
• Chromosome Location: Chr.6: 100385009 - 100464929 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SIM1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_005068.2	NP_005059.2	1 - 2	386		82
	XM_005267100.2	XP_005267157.1	2 - 3	962		82
	XM_011536072.2	XP_011534374.1	2 - 3	962		82
	XM_017011197.1	XP_016866686.1	2 - 3	694		82
GenBank mRNA	U70212.1	-	1 - 2	395		82

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600012670.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06001969.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SIM1

Panther Classification:

Molecular Function -

basic helix-loop-helix transcription factor

Gene Ontology Categories:

Process(es)

ureteric bud development
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
nervous system development
cell differentiation

Function(s)

RNA polymerase II transcription factor activity, sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06024380.hg.1	TC06001969.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06024380.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06024380.hg.1	ENST00000369208.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06024380.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000505753.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000505753.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06024378.hg.1	TC06001969.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06024378.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06024378.hg.1	ENST00000369208.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06024378.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600187387.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187387.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187387.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600187387.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187387.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187387.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600187387.hg.1	TC0600012670.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600187389.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187389.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187389.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187389.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600187389.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187389.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187389.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187389.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600187389.hg.1	TC0600012670.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600187390.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187390.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187390.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187390.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600187390.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187390.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187390.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600187390.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600187390.hg.1	TC0600012670.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000262901.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000369208.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000505753.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000505753.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	ENST00000511871.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq
Affymetrix Human Clariom D Assay	TC0600012670.hg.1	NM_005068.2	Refseq