Assay Details

Gene Symbol: IKBKB
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001190720.2	NP_001177649.1	7 - 8	758		61
	NM_001242778.1	NP_001229707.1	7 - 8	786		61
	NM_001556.2	NP_001547.1	8 - 9	881		61
	NR_033818.1		8 - 9	937		61
	NR_033819.1		8 - 9	881		61
	NR_040009.1		8 - 9	881		61
	XM_005273490.2	XP_005273547.1	8 - 9	881		61
	XM_005273491.4	XP_005273548.1	7 - 8	781		61
	XM_005273492.3	XP_005273549.1	8 - 9	881		61
	XM_005273493.3	XP_005273550.1	5 - 6	577		61
	XM_005273494.2	XP_005273551.1	8 - 9	881		61
	XM_011544517.2	XP_011542819.1	8 - 9	879		61
	XM_011544519.2	XP_011542821.1	7 - 8	749		61
	XM_011544520.2	XP_011542822.1	5 - 6	596		61
	XM_011544522.2	XP_011542824.1	5 - 6	557		61
	XM_017013396.1	XP_016868885.1	7 - 8	834		61
GenBank mRNA	AB209090.1	-	7 - 8	699		61
	AF029684.1	-	7 - 8	695		61
	AF031416.1	-	7 - 8	695		61
	AF080158.1	-	8 - 9	838		61
	AK290952.1	-	8 - 9	747		61
	AK298241.1	-	5 - 6	445		61
	AK302723.1	-	7 - 8	742		61
	AK303294.1	-	7 - 8	770		61
	AK303528.1	-	7 - 8	774		61
	AK316418.1	-	7 - 8	742		61
	BC108694.1	-	8 - 9	793	5784717	61
	BC144080.1	-	7 - 8	725		61
	BX648165.1	-	7 - 8	1333		61

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800007435.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08000325.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_011544522.2,XM_017013396.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Protein Kinase

Mammalian Gene Collection

Homo sapiens

Human PDGF Pathway

Human iNOS Signaling

Human CMV and MAPK Pathways

Human IL-2 Pathway

Human TNFR2 Pathway

Human Signal Transduction Pathways

Human NGF Pathway

Human EGF Pathway

Human IL-1 Pathway

Human Toll-Like Receptors Pathway

Human TNFR1 Pathway

Human Apoptotic Pathways triggered by HIV1

Human TNF Superfamily Pathway

Human Toll Pathway Core Components

HUMAN FAS SIGNALING

HUMAN PI3K SIGNALING IN B-LYMPHOCYTE

HUMAN APOPTOSIS THROUGH DEATH RECEPTORS

HUMAN GPCR PATHWAY

HUMAN THROMBIN SIGNALING

HUMAN IGF1R SIGNALING

HUMAN IL-3 PATHWAY

HUMAN IL-6 PATHWAY

HUMAN CELLULAR APOPTOSIS PATHWAY

Inventoried

Human_TNFR2_Pathway

Human_Toll_Pathway_Core_Components

Human_EGF_Pathway

Human_PDGF_Pathway

Human_Toll-Like_Receptors_Pathway

Human_IL-1_Pathway

Human_iNOS_Signaling

Human_TNFR1_Pathway

Human_Signal_Transduction_Pathways

Human_NGF_Pathway

Human_IL-2_Pathway

Human_TNF_Superfamily_Pathway

Human_Apoptotic_Pathways_Triggered_by_HIV1

Human_IL-6_Pathway

Human_IL-3_Pathway

Human_PI3K_Signaling_in_B-Lymphocyte

Human_Apoptosis_through_Death_Receptors

Human_GPCR_Pathway

Human_Thrombin_Signaling

Human_Fas_Signaling

Human_Cellular_Apoptosis_Pathway

Human_IGF1R_Signaling

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene IKBKB

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

protein modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	TC08000325.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	ENST00000379708.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	ENST00000416505.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	ENST00000520810.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	ENST00000520835.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	NM_001190720.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	NM_001242778.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	NM_001556.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	NR_033818.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	NR_033819.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08004639.hg.1	NR_040009.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000342222.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000416505.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000517890.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000517917.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000518647.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000518679.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000520201.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000520655.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000520810.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000520835.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000521661.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000522545.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000523105.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000523517.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000629753.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NM_001190720.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NM_001242778.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NM_001556.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NR_033818.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NR_033819.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NR_040009.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000342222.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000416505.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000517890.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000517917.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000518647.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000518679.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000520201.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000520655.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000520810.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000520835.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000521661.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000522545.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000523105.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000523517.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	ENST00000629753.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NM_001190720.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NM_001242778.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NM_001556.2	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NR_033818.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NR_033819.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	NR_040009.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800151373.hg.1	TC0800007435.hg.1	Clariom D TC

Citations (1)

NAK is recruited to the TNFR1 complex in a TNFalpha-dependent manner and mediates the production of RANTES: identification of endogenous TNFR-interacting proteins by a proteomic approach.

Authors: Kuai J, Wooters J, Hall JP, Rao VR, Nickbarg E, Li B, Chatterjee-Kishore M, Qiu Y, Lin LL
Journal: J Biol Chem - Page No 53266 (Fri Dec 17 00:00:00 EST 2004)
Volume (Year): 279 (2004)
Product Usage: -

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Catalog #	4331182
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System Message

Genomic Map