Hs00233297_m1

• Gene Symbol: UBR1
• Gene Name: ubiquitin protein ligase E3 component n-recognin 1
• Gene Aliases: JBS
• Chromosome Location: Chr.15: 42942897 - 43106088 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: UBR1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_174916.2	NP_777576.1	25 - 26	2802		103
GenBank mRNA	AF061556.1	-	7 - 8	633		103
	AF525401.1	-	25 - 26	2685		103
	AK027803.1	-	22 - 23	2243		103
	AK056441.1	-	25 - 26	2752		103
	AK292516.1	-	25 - 26	2749		103
	AK302489.1	-	25 - 26	2829		103
	AY061886.1	-	25 - 26	2736		103
	BC113505.1	-	25 - 26	2814	8322557	103
	BC113507.1	-	25 - 26	2814	8322559	103
	CR749326.1	-	7 - 8	1856		103

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1500009204.hg.1
This assay targets the same location as HTA transcript cluster(s) TC15001271.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene UBR1

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein ubiquitination
negative regulation of TOR signaling
cellular response to leucine
ubiquitin-dependent protein catabolic process via the N-end rule pathway

Function(s)

zinc ion binding
ligase activity
ubiquitin protein ligase activity
leucine binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR15011775.hg.1	ENST00000290650.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR15011775.hg.1	ENST00000382177.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR15011775.hg.1	ENST00000546274.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR15011775.hg.1	NM_174916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR15011775.hg.1	TC15001271.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000290650.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000546274.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000564540.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000569066.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000569243.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	NM_174916.2	Refseq
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000290650.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000546274.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000564540.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000569066.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	ENST00000569243.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	NM_174916.2	Refseq
Affymetrix Human Clariom D Assay	PSR1500167011.hg.1	TC1500009204.hg.1	Clariom D TC