Assay Details

Gene Symbol: UBE2D1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001204880.1	NP_001191809.1	1 - 2	248		81
RefSeq	NM_003338.4	NP_003329.1	1 - 2	248		81
GenBank mRNA	AF257220.1	-	1 - 2	171		81
	AJ272367.1	-	1 - 2	171		81
	AK291901.1	-	1 - 2	219		81
	BC005980.1	-	1 - 2	219	4106710	81
	BC015997.1	-	1 - 2	223	4305900	81
	BI598342.1	-	1 - 2	252		81
	DA618122.1	-	1 - 2	221		81
	DA677507.1	-	1 - 2	248		81
	X78140.1	-	1 - 2	40		81

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000007700.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10000360.hg.1

Additional Information:

This assay is in the 5'UTR region of the AF257220.1,AJ272367.1,AK291901.1,BC005980.1,BC015997.1,NM_001204880.1,NM_003338.4,X78140.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Immune Tolerance Network

Mammalian Gene Collection

Homo sapiens

HUMAN UBIQUITIN-PROTEASOME DEPENDENT PROTEOLYSIS

1700

Inventoried

Human_Ubiquitin-Proteasome_Dependent_Proteolysis

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene UBE2D1

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR10004147.hg.1	ENST00000373910.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10004147.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10004147.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10004147.hg.1	TC10000360.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000606483.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000606483.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000606483.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000606483.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10004148.hg.1	ENST00000373910.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10004148.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10004148.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10004148.hg.1	TC10000360.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR10004149.hg.1	ENST00000373910.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10004149.hg.1	NM_001204880.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10004149.hg.1	NM_003338.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10004149.hg.1	TC10000360.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1000152303.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152303.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152303.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152303.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	PSR1000152303.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152303.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152303.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152303.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	PSR1000152303.hg.1	TC1000007700.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000152305.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152305.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152305.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152305.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	PSR1000152305.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152305.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152305.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152305.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	PSR1000152305.hg.1	TC1000007700.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000473824.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000606483.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000606483.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000606483.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000606483.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	TC1000007700.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	PSR1000152302.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152302.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152302.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152302.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	PSR1000152302.hg.1	ENST00000373910.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152302.hg.1	ENST00000615793.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000152302.hg.1	NM_001204880.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000152302.hg.1	NM_003338.4	Refseq
Affymetrix Human Clariom D Assay	PSR1000152302.hg.1	TC1000007700.hg.1	Clariom D TC

Citations (1)

The human COP9 signalosome protects ubiquitin-conjugating enzyme 3 (UBC3/Cdc34) from beta-transducin repeat-containing protein (betaTrCP)-mediated degradation.

Authors: Fernandez-Sanchez ME, Sechet E, Margottin-Goguet F, Rogge L, Bianchi E
Journal: J Biol Chem - Page No 17390 (Fri Jun 04 00:00:00 EDT 2010)
Volume (Year): 285 (2010)
Product Usage: -

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Genomic Map