Hs00234646_m1 Best Coverage

• Gene Symbol: CCL13
• Gene Name: C-C motif chemokine ligand 13
• Gene Aliases: CKb10, MCP-4, NCC-1, NCC1, SCYA13, SCYL1
• Chromosome Location: Chr.17: 34356452 - 34358610 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CCL13
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_005408.2	NP_005399.1	1 - 2	154		74
GenBank mRNA	AJ001634.1	-	1 - 2	121		74
	BC008621.1	-	1 - 2	117	4184250	74
	BT007385.1	-	1 - 2	79		74
	CR450337.1	-	1 - 2	79		74
	U46767.1	-	1 - 2	112		74
	U59808.1	-	1 - 2	154		74
	X98306.1	-	1 - 2	108		74

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700007561.hg.1
This assay targets the same location as HTA transcript cluster(s) TC17000387.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Immune Tolerance Network, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Human Chemokine Panel, Inventoried, Human_Chemokine, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CCL13

Panther Classification:

Molecular Function -

cytokine, intercellular signal molecule

Gene Ontology Categories:

Process(es)

monocyte chemotaxis
cellular calcium ion homeostasis
chemotaxis
inflammatory response
cytoskeleton organization
signal transduction
G-protein coupled receptor signaling pathway
cell-cell signaling
regulation of cell shape
neutrophil chemotaxis
positive regulation of GTPase activity
eosinophil chemotaxis
lymphocyte chemotaxis
positive regulation of inflammatory response
chemokine-mediated signaling pathway
positive regulation of ERK1 and ERK2 cascade
cellular response to interferon-gamma
cellular response to interleukin-1
cellular response to tumor necrosis factor

Function(s)

receptor binding
chemokine activity
CCR chemokine receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR17004895.hg.1	ENST00000225844.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17004895.hg.1	NM_005408.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17004895.hg.1	TC17000387.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	ENST00000577681.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	ENST00000577681.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	ENST00000577681.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17004894.hg.1	ENST00000225844.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17004894.hg.1	NM_005408.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17004894.hg.1	TC17000387.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR17004893.hg.1	ENST00000225844.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17004893.hg.1	NM_005408.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17004893.hg.1	TC17000387.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	ENST00000577681.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	ENST00000577681.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	ENST00000577681.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	TC1700007561.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	PSR1700154410.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154410.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	PSR1700154410.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154410.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	PSR1700154410.hg.1	TC1700007561.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700154411.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154411.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	PSR1700154411.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154411.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	PSR1700154411.hg.1	TC1700007561.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700154412.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154412.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	PSR1700154412.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154412.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	PSR1700154412.hg.1	TC1700007561.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700154414.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154414.hg.1	ENST00000577681.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154414.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	PSR1700154414.hg.1	ENST00000225844.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154414.hg.1	ENST00000577681.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700154414.hg.1	NM_005408.2	Refseq
Affymetrix Human Clariom D Assay	PSR1700154414.hg.1	TC1700007561.hg.1	Clariom D TC