Hs00237035_m1

• Gene Symbol: TRAF3
• Gene Name: TNF receptor associated factor 3
• Gene Aliases: CAP-1, CAP1, CD40bp, CRAF1, IIAE5, LAP1
• Chromosome Location: Chr.14: 102777479 - 102911500 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TRAF3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_003300.3	NP_003291.2	5 - 6	783		66
	NM_145725.2	NP_663777.1	6 - 7	922		66
	NM_145726.2	NP_663778.1	6 - 7	922		66
	XM_011537117.2	XP_011535419.1	6 - 7	898		66
	XM_017021617.1	XP_016877106.1	6 - 7	1342		66
	XM_017021618.1	XP_016877107.1	6 - 7	2838		66
	XM_017021619.1	XP_016877108.1	6 - 7	2840		66
	XM_017021620.1	XP_016877109.1	6 - 7	900		66
GenBank mRNA	BC075086.2	-	4 - 5	594	30915387	66
	BC075087.2	-	4 - 5	594	30915599	66
	BX247977.1	-	6 - 7	768		66
	L38509.1	-	5 - 6	705		66
	U15637.1	-	6 - 7	776		66
	U19260.1	-	5 - 6	719		66
	U21092.1	-	5 - 6	786		66

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1400008362.hg.1
This assay targets the same location as HTA transcript cluster(s) TC14000786.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Apoptosis, Mammalian Gene Collection, Homo sapiens, Human NFkB Pathway, Inventoried, Human_Nfkb, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TRAF3

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

regulation of cytokine production
toll-like receptor signaling pathway
apoptotic process
signal transduction
Toll signaling pathway
protein ubiquitination
regulation of proteolysis
negative regulation of NF-kappaB transcription factor activity
negative regulation of type I interferon production
regulation of interferon-beta production
tumor necrosis factor-mediated signaling pathway
TRIF-dependent toll-like receptor signaling pathway
regulation of apoptotic process
innate immune response
regulation of defense response to virus

Function(s)

ubiquitin-protein transferase activity
signal transducer activity
tumor necrosis factor receptor binding
protein binding
zinc ion binding
ligase activity
protein kinase binding
protein phosphatase binding
ubiquitin protein ligase binding
thioesterase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR14008513.hg.1	ENST00000347662.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14008513.hg.1	ENST00000351691.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14008513.hg.1	ENST00000392745.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14008513.hg.1	ENST00000560371.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14008513.hg.1	NM_003300.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14008513.hg.1	NM_145725.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14008513.hg.1	NM_145726.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14008513.hg.1	TC14000786.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000347662.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000351691.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000392745.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000558700.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000560371.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	NM_003300.3	Refseq
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	NM_145725.2	Refseq
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	NM_145726.2	Refseq
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000347662.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000351691.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000392745.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000558700.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	ENST00000560371.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	NM_003300.3	Refseq
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	NM_145725.2	Refseq
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	NM_145726.2	Refseq
Affymetrix Human Clariom D Assay	PSR1400159672.hg.1	TC1400008362.hg.1	Clariom D TC