Hs00269858_m1 Best Coverage

• Gene Symbol: SLC7A4
• Gene Name: solute carrier family 7 member 4
• Gene Aliases: CAT-4, CAT4, HCAT3, VH
• Chromosome Location: Chr.22: 21028718 - 21032558 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SLC7A4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_004173.2	NP_004164.2	2 - 3	1056		82
GenBank mRNA	AJ000730.1	-	2 - 3	1069		82
	BC008814.2	-	2 - 3	1056	3958091	82
	BC062565.1	-	2 - 3	1050	5165369	82
	BC107160.1	-	1 - 2	1019	40033862	82
	BC107161.1	-	1 - 2	1019	40033864	82
	CR456580.1	-	1 - 2	1021		82

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200008069.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22000529.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Transporter, Mammalian Gene Collection, Recommended Assay, Homo sapiens, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SLC7A4

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

cellular amino acid metabolic process
transport
L-amino acid transport
L-alpha-amino acid transmembrane transport
basic amino acid transmembrane transport

Function(s)

basic amino acid transmembrane transporter activity
L-amino acid transmembrane transporter activity
antiporter activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2200006687.hg.1	ENST00000450652.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200006687.hg.1	ENST00000450652.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200006687.hg.1	ENST00000450652.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22009657.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22009657.hg.1	ENST00000403586.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22009657.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22009657.hg.1	TC22000529.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22009658.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22009658.hg.1	ENST00000403586.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22009658.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22009658.hg.1	TC22000529.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22009659.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22009659.hg.1	ENST00000403586.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22009659.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22009659.hg.1	TC22000529.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22009664.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22009664.hg.1	NM_004173.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22009664.hg.1	TC22000529.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2200157730.hg.1	TC2200008069.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200157730.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157730.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157730.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157730.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200157730.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157730.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157730.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157730.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200157728.hg.1	TC2200008069.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200157728.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157728.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157728.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200157728.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157728.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157728.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200157729.hg.1	TC2200008069.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200157729.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157729.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157729.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157729.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200157729.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157729.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157729.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157729.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	ENST00000426145.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008069.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	TC2200006687.hg.1	ENST00000450652.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200006687.hg.1	ENST00000450652.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200006687.hg.1	ENST00000450652.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157727.hg.1	TC2200008069.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200157727.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157727.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157727.hg.1	NM_004173.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200157727.hg.1	ENST00000382932.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157727.hg.1	ENST00000403586.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200157727.hg.1	NM_004173.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	193063	-	-