Hs00290745_s1

• Gene Symbol: CCEPR
• Gene Name: cervical carcinoma expressed PCNA regulatory lncRNA
• Gene Aliases: CCHE1, lncRNA-CCHE1
• Chromosome Location: Chr.10: 59173963 - 59176464 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CCEPR
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_131782.1		1	155		64
GenBank mRNA	AK055418.1	-	1	155		64
	DA515239.1	-	1	155		64

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA387823.1	-	1	112		Chr. 10 - 59175851 - 59176421 [-] on Build GRCh38	64
GenBankmRNA	DA490845.1	-	1	68		Chr. 10 - 59175799 - 59176377 [-] on Build GRCh38	64
GenBankmRNA	DA534232.1	-	1	140		Chr. 10 - 59175884 - 59176449 [-] on Build GRCh38	64
GenBankmRNA	DA533260.1	-	1	140		Chr. 10 - 59175885 - 59176449 [-] on Build GRCh38	64
GenBankmRNA	DA302412.1	-	1	101		Chr. 10 - 59175863 - 59176410 [-] on Build GRCh38	64
GenBankmRNA	DB201724.1	-	1	140		Chr. 10 - 59175919 - 59176449 [-] on Build GRCh38	64
GenBankmRNA	BI912935.1	-	1	88		Chr. 10 - 59175551 - 59176397 [-] on Build GRCh38	64
GenBankmRNA	DB492433.1	-	1	148		Chr. 10 - 59175992 - 59176456 [-] on Build GRCh38	64
GenBankmRNA	DA391572.1	-	1	227		Chr. 10 - 59175950 - 59176527 [-] on Build GRCh38	64
GenBankmRNA	DB452506.1	-	1	101		Chr. 10 - 59175928 - 59176410 [-] on Build GRCh38	64
GenBankmRNA	DA392020.1	-	1	121		Chr. 10 - 59175835 - 59176430 [-] on Build GRCh38	64
GenBankmRNA	DA912468.1	-	1	140		Chr. 10 - 59175898 - 59176449 [-] on Build GRCh38	64
GenBankmRNA	HY134429.1	-	1	152		Chr. 10 - 59175996 - 59176461 [-] on Build GRCh38	64

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	long intergenic non-protein coding RNA 844	LINC00844		-172.3kb	Anti-sense	Chr. 10 - 58999518 - 59001617 on NCBI Build GRCh38
Downstream	family with sequence similarity 13 member C	FAM13C	FAM13C1	69.7kb	Sense	Chr. 10 - 59245933 - 59363186 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000010715.hg.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR1000172980.hg.1	NR_131782.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000172980.hg.1	TC1000010715.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000172980.hg.1	NR_131782.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000172981.hg.1	NR_131782.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000172981.hg.1	TC1000010715.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000172981.hg.1	NR_131782.1	Refseq