Hs00295149_s1

• Gene Symbol: CDC42EP3
• Gene Name: CDC42 effector protein 3
• Gene Aliases: BORG2, CEP3, UB1
• Chromosome Location: Chr.2: 37641882 - 37672535 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CDC42EP3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001270436.1	NP_001257365.1	2	3721		63
	NM_001270437.1	NP_001257366.1	2	3677		63
	NM_001270438.1	NP_001257367.1	2	3653		63
	NM_006449.4	NP_006440.2	2	4312		63
	XM_011532482.2	XP_011530784.1	2	4118		63
GenBank mRNA	AK055915.1	-	1	851		63

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BU194600.1	-	1	206		Chr. 2 - 37642669 - 37643479 [-] on Build GRCh38	63
GenBankmRNA	R19529.1	-	1			Chr. 2 - 37643113 - 37643429 [-] on Build GRCh38	63
GenBankmRNA	DA252943.1	-	1	404		Chr. 2 - 37643117 - 37643687 [-] on Build GRCh38	63
GenBankmRNA	CD242069.1	-	1	128		Chr. 2 - 37642744 - 37643412 [-] on Build GRCh38	63
GenBankmRNA	CN417889.1	-	1	552		Chr. 2 - 37643101 - 37643837 [-] on Build GRCh38	63
GenBankmRNA	R13631.1	-		90		Chr. - - [-] on Build	63
GenBankmRNA	AL133837.1	-	1	672		Chr. 2 - 37643242 - 37643957 [-] on Build GRCh38	63
GenBankmRNA	BG168552.1	-	1	490		Chr. 2 - 37643169 - 37643766 [-] on Build GRCh38	63
GenBankmRNA	CF121340.1	-	1	347		Chr. 2 - 37642926 - 37643623 [-] on Build GRCh38	63

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	glutaminyl-peptide cyclotransferase	QPCT	GCT, QC, sQC	-268.6kb	Anti-sense	Chr. 2 - 37344610 - 37373322 on NCBI Build GRCh38
Downstream	long intergenic non-protein coding RNA 211	LINC00211	NCRNA00211	182.1kb	Sense	Chr. 2 - 37826247 - 37875863 on NCBI Build GRCh38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Homo sapiens, 1700, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CDC42EP3

Gene Ontology Categories:

Process(es)

signal transduction
Rho protein signal transduction
regulation of cell shape
positive regulation of actin filament polymerization
positive regulation of pseudopodium assembly
positive regulation of GTPase activity

Function(s)

GTPase activator activity
cytoskeletal regulatory protein binding
GTP-Rho binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0200007265.hg.1	ENST00000419425.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200007265.hg.1	ENST00000419425.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200007265.hg.1	ENST00000419425.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200007265.hg.1	ENST00000419425.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200007265.hg.1	ENST00000419425.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200007265.hg.1	ENST00000419425.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200007265.hg.1	ENST00000419425.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200007265.hg.1	ENST00000419425.1	Ensembl

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	104054	-	-