Hs00360662_s1 Best Coverage

• Gene Symbol: KMT5A
• Gene Name: lysine methyltransferase 5A
• Gene Aliases: PR-Set7, SET07, SET8, SETD8
• Chromosome Location: Chr.12: 123383778 - 123409357 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: KMT5A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001324504.1	NP_001311433.1	8	780		61
	NM_001324505.1	NP_001311434.1	6	748		61
	NM_001324506.1	NP_001311435.1	5	654		61
	NM_020382.4	NP_065115.3	7	870		61
	NR_136910.1		8	983		61
	XM_006719394.3	XP_006719457.1	6	700		61
	XM_011538333.2	XP_011536635.1	6	1086		61
GenBank mRNA	AF287261.2	-	1	1060		61
	AK292645.1	-	7	838		61
	AY064546.1	-	1	922		61
	AY102937.1	-	7	800		61
	BC050346.1	-	7	1213	4838030	61
	HQ259683.1	-	7	697		61

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200009239.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000985.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Homo sapiens, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene KMT5A

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
mitotic nuclear division
peptidyl-lysine monomethylation
histone H4-K20 methylation
regulation of DNA damage response, signal transduction by p53 class mediator
negative regulation of transcription, DNA-templated
cell division
regulation of signal transduction by p53 class mediator

Function(s)

p53 binding
transcription corepressor activity
protein binding
lysine N-methyltransferase activity
protein-lysine N-methyltransferase activity
histone-lysine N-methyltransferase activity
histone methyltransferase activity (H4-K20 specific)

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12013027.hg.1	ENST00000330479.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12013027.hg.1	ENST00000402868.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12013027.hg.1	NM_020382.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12013027.hg.1	TC12000985.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	ENST00000330479.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	ENST00000402868.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	ENST00000437502.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	ENST00000437519.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	NM_020382.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	ENST00000330479.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	ENST00000402868.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	ENST00000437502.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	ENST00000437519.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	NM_020382.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200168770.hg.1	TC1200009239.hg.1	Clariom D TC