Hs00389767_m1 Best Coverage

• Gene Symbol: UBR2
• Gene Name: ubiquitin protein ligase E3 component n-recognin 2
• Gene Aliases: C6orf133, bA49A4.1, dJ242G1.1, dJ392M17.3
• Chromosome Location: Chr.6: 42563905 - 42693505 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: UBR2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015255.2	NP_056070.1	22 - 23	2760		69
	XM_005248965.4	XP_005249022.1	22 - 23	2877		69
	XM_005248966.3	XP_005249023.1	21 - 22	2160		69
	XM_011514438.2	XP_011512740.2	22 - 23	2960		69
	XM_011514439.1	XP_011512741.1	13 - 14	1327		69
	XM_011514440.1	XP_011512742.1	13 - 14	1327		69
	XM_011514441.2	XP_011512743.1	10 - 11	940		69
	XM_017010594.1	XP_016866083.1	22 - 23	2961		69
	XM_017010595.1	XP_016866084.1	22 - 23	2961		69
	XM_017010596.1	XP_016866085.1	22 - 23	2795		69
	XM_017010597.1	XP_016866086.1	22 - 23	2962		69
GenBank mRNA	AB002347.1	-	10 - 11	1022		69
	AK125795.1	-	14 - 15	1426		69
	AK304070.1	-	14 - 15	1413		69
	AY061884.1	-	22 - 23	2462		69

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600008050.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000581.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Recommended Assay, Homo sapiens, HUMAN SMAD SIGNALING NETWORK, HUMAN UBIQUITIN-PROTEASOME DEPENDENT PROTEOLYSIS, Inventoried, Human_Ubiquitin-Proteasome_Dependent_Proteolysis, Human_SMAD_Signaling_Network, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene UBR2

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein polyubiquitination
chromatin silencing
male meiosis I
spermatogenesis
negative regulation of TOR signaling
histone H2A ubiquitination
cellular response to leucine
ubiquitin-dependent protein catabolic process via the N-end rule pathway

Function(s)

ubiquitin-protein transferase activity
protein binding
zinc ion binding
ligase activity
ubiquitin protein ligase activity
leucine binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06006576.hg.1	TC06000581.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06006576.hg.1	ENST00000372883.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06006576.hg.1	ENST00000372899.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06006576.hg.1	ENST00000372901.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06006576.hg.1	NM_015255.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600155842.hg.1	ENST00000372899.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600155842.hg.1	ENST00000372901.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600155842.hg.1	NM_015255.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600155842.hg.1	ENST00000372899.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600155842.hg.1	ENST00000372901.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600155842.hg.1	NM_015255.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600155842.hg.1	TC0600008050.hg.1	Clariom D TC