Hs00390180_m1

• Gene Symbol: VPS13D
• Gene Name: vacuolar protein sorting 13 homolog D
• Gene Aliases: -
• Chromosome Location: Chr.1: 12230039 - 12512047 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: VPS13D
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015378.3	NP_056193.2	57 - 58	11348		73
	NM_018156.3	NP_060626.2	56 - 57	11273		73
GenBank mRNA	AB007922.3	-	39 - 40	7655		73
	AJ608774.1	-	57 - 58	11320		73
	AJ608775.1	-	56 - 57	11245		73
	AL833079.1	-	12 - 13	1959		73
	AL833320.1	-		1674		73
	BC028115.1	-	15 - 16	2264		73
	BC051804.1	-	5 - 6	750		73
	BX641035.1	-	31 - 32	4836		73

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100006884.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000156.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene VPS13D

Gene Ontology Categories:

Process(es)

protein targeting to vacuole
protein retention in Golgi apparatus

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01002681.hg.1	ENST00000356315.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01002681.hg.1	ENST00000358136.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01002681.hg.1	ENST00000496628.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01002681.hg.1	NM_015378.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01002681.hg.1	NM_018156.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01002681.hg.1	TC01000156.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	ENST00000011700.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	ENST00000543710.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	ENST00000613099.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	ENST00000620676.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	NM_015378.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	NM_018156.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	TC0100006884.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	ENST00000613099.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	ENST00000011700.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	ENST00000543710.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	ENST00000620676.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	NM_015378.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100148039.hg.1	NM_018156.3	Refseq