Hs00390439_m1

• Gene Symbol: VPS13B
• Gene Name: vacuolar protein sorting 13 homolog B
• Gene Aliases: CHS1, COH1
• Chromosome Location: Chr.8: 99007014 - 99877586 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: VPS13B
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017890.4	NP_060360.3	51 - 52	9512		80
	NM_152564.4	NP_689777.3	51 - 52	9437		80
	XM_005250800.3	XP_005250857.1	51 - 52	9818		80
	XM_005250801.4	XP_005250858.1	51 - 52	15688		80
	XM_011516848.2	XP_011515150.1	51 - 52	9501		80
	XM_011516849.2	XP_011515151.1	51 - 52	9426		80
	XM_011516850.2	XP_011515152.1	49 - 50	9144		80
	XM_011516851.2	XP_011515153.1	31 - 32	6404		80
	XM_011516852.2	XP_011515154.1	31 - 32	6442		80
	XM_011516854.2	XP_011515156.1	27 - 28	5600		80
	XM_017013109.1	XP_016868598.1	50 - 51	9309		80
	XM_017013110.1	XP_016868599.1	44 - 45	8302		80
	XM_017013111.1	XP_016868600.1	31 - 32	6674		80
	XM_017013112.1	XP_016868601.1	28 - 29	5816		80
GenBank mRNA	AB011104.1	-	12 - 13	2246		80
	AJ608772.1	-	51 - 52	9504		80
	AJ608773.1	-	51 - 52	9429		80
	AY223814.1	-	51 - 52	9512		80
	AY223815.1	-	51 - 52	9437		80

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800008352.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08000608.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene VPS13B

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

protein transport

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR08008489.hg.1	TC08000608.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08008489.hg.1	ENST00000357162.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08008489.hg.1	ENST00000358544.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08008489.hg.1	ENST00000395996.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08008489.hg.1	NM_017890.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08008489.hg.1	NM_152564.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157594.hg.1	ENST00000357162.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157594.hg.1	ENST00000358544.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157594.hg.1	NM_017890.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157594.hg.1	NM_152564.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157594.hg.1	ENST00000357162.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157594.hg.1	ENST00000358544.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157594.hg.1	NM_017890.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157594.hg.1	NM_152564.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157594.hg.1	TC0800008352.hg.1	Clariom D TC