Hs00405578_g1

• Gene Symbol: PATL1
• Gene Name: PAT1 homolog 1, processing body mRNA decay factor
• Gene Aliases: Pat1b, hPat1b
• Chromosome Location: Chr.11: 59636716 - 59669040 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PATL1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_152716.2	NP_689929.2	10 - 11	1452		98
	XM_005273833.4	XP_005273890.1	10 - 11	2574		98
	XM_005273834.1	XP_005273891.1	9 - 10	1364		98
	XM_011544811.2	XP_011543113.1	6 - 7	787		98
	XM_017017339.1	XP_016872828.1	11 - 12	1528		98
GenBank mRNA	AK094193.1	-	7 - 8	963		98
	AK127943.1	-	9 - 10	1322		98
	AK293213.1	-	5 - 6	645		98
	AL831992.2	-	10 - 11	1393		98
	BC065264.1	-	7 - 8	946	6156770	98
	BC109038.1	-	7 - 8	907	40028492	98
	BC109039.1	-	7 - 8	907	40028497	98
	BC111047.1	-	8 - 9	1114		98

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100010981.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11001829.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PATL1

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

deadenylation-dependent decapping of nuclear-transcribed mRNA
cytoplasmic mRNA processing body assembly
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

RNA binding
protein binding
poly(U) RNA binding
poly(G) binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11021062.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11021062.hg.1	ENST00000428532.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11021062.hg.1	NM_152716.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11021062.hg.1	TC11001829.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	ENST00000531919.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010981.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182810.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100182810.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182810.hg.1	ENST00000300146.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1100182810.hg.1	NM_152716.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100182810.hg.1	TC1100010981.hg.1	Clariom D TC