Hs00406231_g1

• Gene Symbol: SVIP
• Gene Name: small VCP interacting protein
• Gene Aliases: -
• Chromosome Location: Chr.11: 22820263 - 22829862 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SVIP
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001320340.1	NP_001307269.1	3 - 4	441		108
	NM_148893.2	NP_683691.1	3 - 4	332		108
	NR_135213.1		3 - 4	287		108
GenBank mRNA	AF527534.1	-	3 - 4	306		108
	AL833119.1	-	3 - 4	305		108
	BF219509.1	-	3 - 4	295		109
	BG531443.1	-	3 - 4	267		109
	BI826588.1	-	3 - 4	440		108
	DB135755.1	-	3 - 4	335		108

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100010349.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11001499.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Detect Genomic DNA, Homo sapiens, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

positive regulation of autophagy
negative regulation of protein complex assembly
positive regulation of protein lipidation
negative regulation of ER-associated ubiquitin-dependent protein catabolic process
negative regulation of retrograde protein transport, ER to cytosol
negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly

Function(s)

protein binding
protein self-association
ATPase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR11018792.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11018792.hg.1	NM_148893.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11018792.hg.1	TC11001499.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000529848.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000529848.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000529848.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100178570.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100178570.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100178570.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100178570.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100178570.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100178570.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100178570.hg.1	TC1100010349.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000525670.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000529848.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000529848.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000529848.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000530199.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	ENST00000533774.5	Ensembl
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	TC1100010349.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100178569.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100178569.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100178569.hg.1	ENST00000354193.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1100178569.hg.1	NM_148893.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100178569.hg.1	TC1100010349.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	167622	-	-