Hs00410670_m1

• Gene Symbol: PTPRK
• Gene Name: protein tyrosine phosphatase, receptor type K
• Gene Aliases: R-PTP-kappa
• Chromosome Location: Chr.6: 127968779 - 128520847 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PTPRK
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001135648.2	NP_001129120.1	15 - 16	2810		71
	NM_001291984.1	NP_001278913.1	15 - 16	2807		71
	NM_002844.3	NP_002835.2	15 - 16	2810		71
	XM_006715537.2	XP_006715600.1	15 - 16	2858		71
	XM_017011145.1	XP_016866634.1	16 - 17	2825		71
	XM_017011146.1	XP_016866635.1	16 - 17	2774		71
	XM_017011147.1	XP_016866636.1	16 - 17	2752		71
	XM_017011148.1	XP_016866637.1	16 - 17	2749		71
GenBank mRNA	AF533875.1	-	15 - 16	2575		71
	BC140775.1	-	15 - 16	2612	9021643	71
	BC144512.1	-	15 - 16	2612	9053039	71
	L77886.1	-	15 - 16	2509		71
	Z70660.1	-	15 - 16	2491		71

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600013126.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06002092.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Protein Phosphatase, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPRK

Panther Classification:

Molecular Function -

extracellular matrix glycoprotein

Gene Ontology Categories:

Process(es)

protein dephosphorylation
cell adhesion
signal transduction
transforming growth factor beta receptor signaling pathway
negative regulation of cell proliferation
negative regulation of keratinocyte proliferation
cell migration
negative regulation of cell migration
neuron projection development
protein localization to cell surface
cellular response to reactive oxygen species
cellular response to UV
peptidyl-tyrosine dephosphorylation
negative regulation of cell cycle
negative regulation of transcription, DNA-templated
focal adhesion assembly

Function(s)

protein tyrosine phosphatase activity
transmembrane receptor protein tyrosine phosphatase activity
protein binding
beta-catenin binding
protein kinase binding
gamma-catenin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	TC06002092.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	ENST00000368207.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	ENST00000368210.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	ENST00000368213.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	ENST00000368215.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	ENST00000368226.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	ENST00000368227.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	ENST00000532331.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	NM_001135648.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06026206.hg.1	NM_002844.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368207.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368210.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368213.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368215.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368226.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000415046.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000415055.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000532331.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	NM_001291984.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	NM_002844.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368207.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368210.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368213.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368215.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000368226.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000415046.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000415055.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	ENST00000532331.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	NM_001291984.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	NM_002844.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600190541.hg.1	TC0600013126.hg.1	Clariom D TC