Assay Details

Gene Symbol: CDPF1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_207327.4	NP_997210.3	2 - 3	153		79
	XM_011529960.1	XP_011528262.1	2 - 3	536		79
	XM_011529962.2	XP_011528264.1	2 - 3	144		79
	XM_011529965.2	XP_011528267.1	2 - 3	469		79
GenBank mRNA	BC036462.1	-	2 - 3	151		79
	BC045796.2	-	1 - 2	83		79
	BC067871.1	-	2 - 3	153	30338205	79
	BX648331.1	-	2 - 3	161		79

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200009013.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22000886.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Mammalian Gene Collection

Recommended Assay

Homo sapiens

1700

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CDPF1

Gene Ontology Categories:

Process(es)

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR22014907.hg.1	ENST00000314567.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22014907.hg.1	ENST00000404583.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22014907.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22014907.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22014907.hg.1	TC22000886.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22014909.hg.1	ENST00000314567.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22014909.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22014909.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22014909.hg.1	TC22000886.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22014906.hg.1	ENST00000314567.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22014906.hg.1	ENST00000404583.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22014906.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22014906.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22014906.hg.1	TC22000886.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	TC2200009013.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165311.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009013.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	TC2200009013.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	ENST00000474256.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	ENST00000475605.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165314.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	TC2200009013.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	NM_207327.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	ENST00000314567.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	ENST00000381037.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	ENST00000404583.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	ENST00000404744.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200165312.hg.1	NM_207327.4	Refseq

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Genomic Map