Hs00828074_m1

• Gene Symbol: APOBEC3C
• Gene Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3C
• Gene Aliases: A3C, APOBEC1L, ARDC2, ARDC4, ARP5, PBI, bK150C2.3
• Chromosome Location: Chr.22: 39014260 - 39018838 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: APOBEC3C
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_014508.2	NP_055323.2	1 - 2	118		110
GenBank mRNA	AB208979.1	-	1 - 2	83		110
	AF165520.1	-	1 - 2	122		110
	AK094570.1	-		1432		110
	AK313272.1	-	1 - 2	122		110
	BC011739.2	-	1 - 2	118	4331363	110
	BC021080.1	-	1 - 2	105		110
	CR456394.1	-	1 - 2	96		110

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200009271.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22001426.hg.1

Additional Information:

This assay is in the 5'UTR region of the AF165520.1,AK313272.1,BC011739.2,CR456394.1,NM_014508.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene APOBEC3C

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

cytidine deamination
negative regulation of transposition
negative regulation of viral genome replication
innate immune response
defense response to virus
DNA demethylation

Function(s)

protein binding
zinc ion binding
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR22005785.hg.1	TC22001426.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22005785.hg.1	ENST00000361441.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005785.hg.1	NM_014508.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22005787.hg.1	TC22001426.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22005787.hg.1	ENST00000361441.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005787.hg.1	NM_014508.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	NM_014508.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	NM_014508.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	NM_014508.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	NM_014508.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009271.hg.1	NM_014508.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200168883.hg.1	TC2200009271.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200168883.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168883.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168883.hg.1	NM_014508.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200168883.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168883.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168883.hg.1	NM_014508.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200168885.hg.1	TC2200009271.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200168885.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168885.hg.1	NM_014508.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200168885.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168885.hg.1	NM_014508.2	Refseq
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000361441.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	ENST00000428892.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	NM_014508.2	Refseq
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	NM_014508.2	Refseq
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	NM_014508.2	Refseq
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	NM_014508.2	Refseq
Affymetrix Human Clariom D Assay	TC2200009271.hg.1	NM_014508.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	132926	-	-