Hs00896271_m1

• Gene Symbol: ABCA5
• Gene Name: ATP binding cassette subfamily A member 5
• Gene Aliases: ABC13, EST90625
• Chromosome Location: Chr.17: 69244435 - 69327182 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ABCA5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_018672.4	NP_061142.2	34 - 35	5750		146
	NM_172232.3	NP_758424.1	35 - 36	4678		146
GenBank mRNA	AB067475.1	-	16 - 17	1818		146
	AJ275973.3	-	35 - 36	4597		146
	AK056533.1	-	21 - 22	2479		146
	AK058170.1	-	9 - 10	974		146
	AK094416.1	-	21 - 22	2529		146
	AK122803.1	-	14 - 15	1657		146
	AY028897.1	-	34 - 35	5542		146
	BX647447.1	-	14 - 15	1611		146

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700012460.hg.1
This assay targets the same location as HTA transcript cluster(s) TC17001830.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene ABCA5

Panther Classification:

Molecular Function -

ATP-binding cassette (ABC) transporter, primary active transporter, transporter

Gene Ontology Categories:

Process(es)

lipid transport
negative regulation of macrophage derived foam cell differentiation
cholesterol efflux
high-density lipoprotein particle remodeling
reverse cholesterol transport
transmembrane transport

Function(s)

ATP binding
ATPase activity, coupled to transmembrane movement of substances

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR17024641.hg.1	ENST00000392676.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17024641.hg.1	ENST00000392677.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17024641.hg.1	NM_018672.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17024641.hg.1	NM_172232.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17024641.hg.1	TC17001830.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000392676.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000586811.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000586995.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000588106.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000588877.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000591234.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	NM_018672.4	Refseq
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	NM_172232.3	Refseq
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000392676.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000586811.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000586995.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000588106.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000588877.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	ENST00000591234.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	NM_018672.4	Refseq
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	NM_172232.3	Refseq
Affymetrix Human Clariom D Assay	PSR1700207543.hg.1	TC1700012460.hg.1	Clariom D TC