Hs00902223_g1

• Gene Symbol: SYCP2
• Gene Name: synaptonemal complex protein 2
• Gene Aliases: SCP-2, SCP2
• Chromosome Location: Chr.20: 59863277 - 59933700 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SYCP2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_014258.3	NP_055073.2	37 - 38	4073		127
	XM_011528487.2	XP_011526789.1	37 - 38	4109		127
	XM_011528488.2	XP_011526790.1	37 - 38	4061		127
	XM_011528489.2	XP_011526791.1	37 - 38	4104		127
	XM_011528490.2	XP_011526792.1	37 - 38	4085		127
	XM_011528493.2	XP_011526795.1	36 - 37	4024		127
	XM_017027586.1	XP_016883075.1	36 - 37	4305		127
	XM_017027587.1	XP_016883076.1	36 - 37	4302		127
	XM_017027589.1	XP_016883078.1	35 - 36	4135		127
	XM_017027590.1	XP_016883079.1	36 - 37	3998		127
	XM_017027591.1	XP_016883080.1	28 - 29	3404		127
GenBank mRNA	BC132864.1	-	36 - 37	3942	40146886	127
	BC132870.1	-	36 - 37	3944	40146892	127
	BX648091.1	-	37 - 38	4026		127
	BX649108.1	-	37 - 38	4051		127
	Y08982.1	-	35 - 36	3852		127

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000009673.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000999.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SYCP2

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

synaptonemal complex assembly
male meiosis
female meiotic division
fertilization
negative regulation of apoptotic process
male genitalia morphogenesis
cell division

Function(s)

DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR20013585.hg.1	ENST00000357552.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013585.hg.1	ENST00000371001.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20013585.hg.1	NM_014258.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20013585.hg.1	TC20000999.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2000167471.hg.1	ENST00000357552.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167471.hg.1	ENST00000371001.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167471.hg.1	ENST00000412613.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167471.hg.1	NM_014258.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000167471.hg.1	TC2000009673.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000167471.hg.1	ENST00000357552.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167471.hg.1	ENST00000371001.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167471.hg.1	ENST00000412613.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000167471.hg.1	NM_014258.3	Refseq