Hs00905771_m1

• Gene Symbol: SMURF1
• Gene Name: SMAD specific E3 ubiquitin protein ligase 1
• Gene Aliases: -
• Chromosome Location: Chr.7: 99027435 - 99144120 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SMURF1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_020429.2	NP_065162.1	9 - 10	1222		91
	XM_017012457.1	XP_016867946.1	9 - 10	1220		91
GenBank mRNA	AB046845.1	-	9 - 10	1190		91
	AF464850.1	-	9 - 10	882		91
	BC152468.1	-	9 - 10	1190	8862605	91

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700011929.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07001639.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SMURF1

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein polyubiquitination
positive regulation of defense response to virus by host
protein export from nucleus
transforming growth factor beta receptor signaling pathway
ectoderm development
protein ubiquitination
cell differentiation
negative regulation of ossification
BMP signaling pathway
negative regulation of transforming growth factor beta receptor signaling pathway
negative regulation of BMP signaling pathway
ubiquitin-dependent SMAD protein catabolic process
receptor catabolic process
protein localization to cell surface
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
Wnt signaling pathway, planar cell polarity pathway
engulfment of target by autophagosome
protein targeting to vacuole involved in autophagy
protein targeting to plasma membrane
mitophagy in response to mitochondrial depolarization
positive regulation of dendrite extension
positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Function(s)

ubiquitin-protein transferase activity
protein binding
phospholipid binding
ligase activity
activin binding
ubiquitin protein ligase activity
I-SMAD binding
R-SMAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07024999.hg.1	TC07001639.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07024999.hg.1	ENST00000361125.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07024999.hg.1	ENST00000361368.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07024999.hg.1	NM_001199847.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07024999.hg.1	NM_020429.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07024999.hg.1	NM_181349.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	ENST00000361125.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	ENST00000361368.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	NM_001199847.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	NM_020429.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	NM_181349.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	ENST00000361125.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	ENST00000361368.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	NM_001199847.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	NM_020429.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	NM_181349.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700185303.hg.1	TC0700011929.hg.1	Clariom D TC