Assay Details

Gene Symbol: CDH20
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031891.3	NP_114097.2	2 - 3	647		59
GenBank mRNA	AF217289.1	-	1 - 2	261		59
	AK290190.1	-	2 - 3	474		59
	AK313809.1	-	2 - 3	526		59
	BC101047.1	-	1 - 2	261	40007940	59
	BC101048.1	-	1 - 2	261	40007941	59
	BC101049.1	-	1 - 2	261	40007942	59
	DA339323.1	-	2 - 3	487		59

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1800007490.hg.1
This assay targets the same location as HTA transcript cluster(s) TC18000217.hg.1

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CDH20

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR18002462.hg.1	ENST00000262717.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002462.hg.1	ENST00000536675.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002462.hg.1	ENST00000538374.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002462.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18002462.hg.1	TC18000217.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR18002463.hg.1	ENST00000262717.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002463.hg.1	ENST00000536675.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002463.hg.1	ENST00000538374.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002463.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18002463.hg.1	TC18000217.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR18002464.hg.1	ENST00000262717.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002464.hg.1	ENST00000536675.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002464.hg.1	ENST00000538374.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002464.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18002464.hg.1	TC18000217.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR18002465.hg.1	ENST00000262717.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002465.hg.1	ENST00000536675.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002465.hg.1	ENST00000538374.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18002465.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18002465.hg.1	TC18000217.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000587582.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000587582.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	ENST00000587582.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800151344.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151344.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151344.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151344.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800151344.hg.1	TC1800007490.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800151344.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151344.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151344.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151344.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000587582.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000587582.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	ENST00000587582.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	TC1800007490.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800151345.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151345.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151345.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151345.hg.1	NM_031891.3	Refseq
Affymetrix Human Clariom D Assay	PSR1800151345.hg.1	TC1800007490.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800151345.hg.1	ENST00000262717.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151345.hg.1	ENST00000536675.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151345.hg.1	ENST00000538374.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800151345.hg.1	NM_031891.3	Refseq

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Catalog #	4351372
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System Message

Genomic Map