Hs00907924_m1

• Gene Symbol: TRAT1
• Gene Name: T cell receptor associated transmembrane adaptor 1
• Gene Aliases: HSPC062, TCRIM, TRIM, pp29/30
• Chromosome Location: Chr.3: 108822698 - 108855005 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TRAT1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_016388.3	NP_057472.2	1 - 2	241		149
GenBank mRNA	AF161547.1	-	1 - 2	156		149
	AJ224878.1	-	1 - 2	140		149
	AK291991.1	-	1 - 2	241		149
	BC025713.1	-	1 - 2	147	5227396	149
	BX415345.2	-	1 - 2	149		149

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300008290.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000549.hg.1

Additional Information:

This assay is in the 5'UTR region of the AF161547.1,AJ224878.1,AK291991.1,BC025713.1,NM_016388.3 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TRAT1

Panther Classification:

Molecular Function -

defense/immunity protein

Gene Ontology Categories:

Process(es)

negative regulation of receptor recycling
adaptive immune response
cellular defense response
signal transduction
transmembrane receptor protein tyrosine kinase signaling pathway
regulation of phosphatidylinositol 3-kinase signaling
phosphatidylinositol phosphorylation
phosphatidylinositol-mediated signaling
positive regulation of calcium-mediated signaling
T cell receptor signaling pathway
positive regulation of T cell receptor signaling pathway
negative regulation of transport

Function(s)

transmembrane receptor protein tyrosine kinase adaptor activity
phosphatidylinositol-4,5-bisphosphate 3-kinase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03010083.hg.1	TC03000549.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03010083.hg.1	ENST00000295756.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010083.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010083.hg.1	ENST00000493604.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010083.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03010085.hg.1	TC03000549.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03010085.hg.1	ENST00000295756.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010085.hg.1	ENST00000493604.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010085.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03010086.hg.1	TC03000549.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03010086.hg.1	ENST00000295756.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010086.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010086.hg.1	ENST00000493604.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010086.hg.1	NM_016388.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03010084.hg.1	TC03000549.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03010084.hg.1	ENST00000295756.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010084.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010084.hg.1	ENST00000493604.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03010084.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300158978.hg.1	TC0300008290.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300158979.hg.1	TC0300008290.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000426646.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	TC0300008290.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	ENST00000295756.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	ENST00000478830.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	ENST00000484927.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	ENST00000493604.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	NM_016388.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300158981.hg.1	TC0300008290.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	139804	-	-