Hs00910540_m1

• Gene Symbol: TJP2
• Gene Name: tight junction protein 2
• Gene Aliases: C9DUPq21.11, DFNA51, DUP9q21.11, PFIC4, X104, ZO2
• Chromosome Location: Chr.9: 69099907 - 69255208 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TJP2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001170415.1	NP_001163886.1	20 - 21	3379		78
	NM_001170416.1	NP_001163887.1	21 - 22	3420		78
	NM_004817.3	NP_004808.2	21 - 22	3645		78
	XM_005252314.2	XP_005252371.1	21 - 22	3698		78
	XM_011519204.1	XP_011517506.1	20 - 21	3277		78
	XM_011519206.2	XP_011517508.1	23 - 24	3990		78
	XM_011519207.2	XP_011517509.1	22 - 23	3486		78
	XM_011519208.2	XP_011517510.1	22 - 23	3446		78
	XM_011519209.2	XP_011517511.1	20 - 21	3275		78
	XM_017015326.1	XP_016870815.1	22 - 23	3543		78
	XM_017015327.1	XP_016870816.1	20 - 21	3534		78
GenBank mRNA	AK295034.1	-	21 - 22	3420		78
	AK304447.1	-	23 - 24	3395		78
	AK307697.1	-	4 - 5	866		78
	BC027592.1	-	21 - 22	3536	4839233	78
	L27476.1	-	21 - 22	3410		78
	U84581.1	-	1 - 2	191		78

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900007497.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09000319.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TJP2

Panther Classification:

Molecular Function -

tight junction

Gene Ontology Categories:

Process(es)

hippo signaling
GMP metabolic process
GDP metabolic process
intestinal absorption
TNFSF11-mediated signaling pathway
establishment of endothelial intestinal barrier
regulation of membrane permeability
cell-cell adhesion
negative regulation of osteoclast development

Function(s)

guanylate kinase activity
protein binding
protein C-terminus binding
protein domain specific binding
protein binding, bridging
cadherin binding involved in cell-cell adhesion

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	TC09000319.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	ENST00000348208.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	ENST00000377245.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	ENST00000453658.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	ENST00000535702.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	ENST00000539225.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	NM_001170414.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	NM_001170415.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	NM_001170416.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	NM_004817.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09003340.hg.1	NM_201629.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000348208.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000377245.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000453658.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000535702.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000539225.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_001170414.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_001170415.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_001170416.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_004817.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_201629.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000348208.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000377245.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000453658.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000535702.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	ENST00000539225.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_001170414.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_001170415.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_001170416.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_004817.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	NM_201629.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900150835.hg.1	TC0900007497.hg.1	Clariom D TC