Hs00915028_m1 Best Coverage

• Gene Symbol: PRPF6
• Gene Name: pre-mRNA processing factor 6
• Gene Aliases: ANT-1, ANT1, C20orf14, Prp6, RP60, SNRNP102, TOM, U5-102K, hPrp6
• Chromosome Location: Chr.20: 63981069 - 64033100 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PRPF6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012469.3	NP_036601.2	12 - 13	1810		63
	XM_006723769.2	XP_006723832.1	11 - 12	1600		63
GenBank mRNA	AB019219.1	-	12 - 13	1724		63
	AF026031.1	-	12 - 13	1741		63
	AF221842.1	-	12 - 13	1747		63
	AK001554.1	-	12 - 13	1753		63
	AK225993.1	-	12 - 13	1764		63
	AK314310.1	-	12 - 13	1734		63
	AL137320.1	-	3 - 4	441		63
	BC001666.2	-	12 - 13	1688	2988165	63

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000008104.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000531.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PRPF6

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

spliceosomal tri-snRNP complex assembly
spliceosomal complex assembly
RNA splicing, via transesterification reactions
mRNA splicing, via spliceosome
RNA localization
RNA splicing
positive regulation of transcription from RNA polymerase II promoter

Function(s)

transcription coactivator activity
RNA binding
protein binding
ribonucleoprotein complex binding
poly(A) RNA binding
androgen receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR20007596.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007596.hg.1	ENST00000535781.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007596.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20007596.hg.1	TC20000531.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20007597.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007597.hg.1	ENST00000535781.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007597.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20007597.hg.1	TC20000531.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2000156790.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156790.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156790.hg.1	TC2000008104.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000156790.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156790.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156789.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156789.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156789.hg.1	TC2000008104.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000156789.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156789.hg.1	NM_012469.3	Refseq