Hs00915036_m1

• Gene Symbol: PRPF6
• Gene Name: pre-mRNA processing factor 6
• Gene Aliases: ANT-1, ANT1, C20orf14, Prp6, RP60, SNRNP102, TOM, U5-102K, hPrp6
• Chromosome Location: Chr.20: 63981069 - 64033100 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PRPF6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012469.3	NP_036601.2	1 - 2	244		72
	XM_006723769.2	XP_006723832.1	1 - 2	253		72
GenBank mRNA	AB019219.1	-	1 - 2	158		72
	AF026031.1	-	1 - 2	175		72
	AF221842.1	-	1 - 2	181		72
	AK001554.1	-	1 - 2	187		72
	AK225993.1	-	1 - 2	198		72
	AK314310.1	-	1 - 2	168		72
	BC001666.2	-	1 - 2	122	2988165	72

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000008104.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000531.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PRPF6

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

spliceosomal tri-snRNP complex assembly
spliceosomal complex assembly
RNA splicing, via transesterification reactions
mRNA splicing, via spliceosome
RNA localization
RNA splicing
positive regulation of transcription from RNA polymerase II promoter

Function(s)

transcription coactivator activity
RNA binding
protein binding
ribonucleoprotein complex binding
poly(A) RNA binding
androgen receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR20007584.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007584.hg.1	ENST00000535781.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007584.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20007584.hg.1	TC20000531.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20007582.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20007582.hg.1	TC20000531.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20007583.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007583.hg.1	ENST00000535781.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007583.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20007583.hg.1	TC20000531.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR20007585.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007585.hg.1	ENST00000535781.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20007585.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20007585.hg.1	TC20000531.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	TC2000008104.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156775.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156775.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156775.hg.1	TC2000008104.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000156775.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156775.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156778.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156778.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156778.hg.1	TC2000008104.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000156778.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156778.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156776.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156776.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156776.hg.1	TC2000008104.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000156776.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156776.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156777.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156777.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156777.hg.1	TC2000008104.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000156777.hg.1	ENST00000266079.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000156777.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156774.hg.1	NM_012469.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000156774.hg.1	TC2000008104.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000156774.hg.1	NM_012469.3	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	190621	-	-