Hs00915439_g1

• Gene Symbol: SFPQ
• Gene Name: splicing factor proline and glutamine rich
• Gene Aliases: POMP100, PPP1R140, PSF
• Chromosome Location: Chr.1: 35176378 - 35193161 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SFPQ
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_005066.2	NP_005057.1	2 - 3	1104		141
	NR_136702.1		2 - 3	1107		141
	NR_136703.1		2 - 3	1107		141
	XM_005271112.4	XP_005271169.1	2 - 3	1123		141
	XM_005271113.4	XP_005271170.1	2 - 3	1123		141
	XM_005271115.4	XP_005271172.1	2 - 3	1123		141
	XM_011541950.2	XP_011540252.1	2 - 3	1123		141
	XM_017002053.1	XP_016857542.1	2 - 3	1123		141
	XM_017002054.1	XP_016857543.1	2 - 3	1123		141
GenBank mRNA	AK307985.1	-	3 - 4	912		142
	BC004534.2	-	2 - 3	792		141
	BC027708.2	-	2 - 3	1095		141
	BC051192.1	-	2 - 3	1106	5262885	141
	X70944.1	-	2 - 3	1096		141

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100018432.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01002493.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SFPQ

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
alternative mRNA splicing, via spliceosome
double-strand break repair via homologous recombination
transcription, DNA-templated
mRNA processing
RNA splicing
regulation of circadian rhythm
negative regulation of circadian rhythm
positive regulation of sister chromatid cohesion
negative regulation of transcription, DNA-templated
rhythmic process
histone H3 deacetylation
positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway

Function(s)

nucleotide binding
transcription regulatory region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
core promoter binding
chromatin binding
protein binding
histone deacetylase binding
transcription regulatory region DNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01038693.hg.1	TC01002493.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01038693.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01038693.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01038692.hg.1	TC01002493.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01038692.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01038692.hg.1	NM_005066.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01038694.hg.1	TC01002493.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01038694.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01038694.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241804.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241804.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241804.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241804.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241804.hg.1	TC0100018432.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100241802.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241802.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241802.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241802.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241802.hg.1	TC0100018432.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100241805.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241805.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241805.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241805.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241805.hg.1	TC0100018432.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100241806.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241806.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241806.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241806.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241806.hg.1	TC0100018432.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100241807.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241807.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241807.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241807.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241807.hg.1	TC0100018432.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	TC0100018432.hg.1	NM_005066.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	108419	-	-