Hs00915445_g1

• Gene Symbol: SFPQ
• Gene Name: splicing factor proline and glutamine rich
• Gene Aliases: POMP100, PPP1R140, PSF
• Chromosome Location: Chr.1: 35176378 - 35193161 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SFPQ
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_005066.2	NP_005057.1	8 - 9	1963		78
	NR_136702.1		8 - 9	1966		78
	NR_136703.1		8 - 9	1978		78
	XM_005271112.4	XP_005271169.1	8 - 9	1982		78
	XM_005271113.4	XP_005271170.1	8 - 9	1982		78
	XM_005271115.4	XP_005271172.1	8 - 9	1982		78
	XM_011541950.2	XP_011540252.1	8 - 9	1982		78
	XM_017002053.1	XP_016857542.1	8 - 9	1982		78
	XM_017002054.1	XP_016857543.1	8 - 9	1982		78
GenBank mRNA	BC004534.2	-	8 - 9	1651		78
	BC051192.1	-	8 - 9	1965	5262885	78
	X16850.1	-	7 - 8	937		78
	X70944.1	-	8 - 9	1955		78

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100018432.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01002493.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SFPQ

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
alternative mRNA splicing, via spliceosome
double-strand break repair via homologous recombination
transcription, DNA-templated
mRNA processing
RNA splicing
regulation of circadian rhythm
negative regulation of circadian rhythm
positive regulation of sister chromatid cohesion
negative regulation of transcription, DNA-templated
rhythmic process
histone H3 deacetylation
positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway

Function(s)

nucleotide binding
transcription regulatory region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
core promoter binding
chromatin binding
protein binding
histone deacetylase binding
transcription regulatory region DNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01038684.hg.1	TC01002493.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01038684.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01038684.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241796.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241796.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241796.hg.1	ENST00000357214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100241796.hg.1	NM_005066.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100241796.hg.1	TC0100018432.hg.1	Clariom D TC