Hs00915897_m1

• Gene Symbol: LYST
• Gene Name: lysosomal trafficking regulator
• Gene Aliases: CHS, CHS1
• Chromosome Location: Chr.1: 235661031 - 235883708 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LYST
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000081.3	NP_000072.2	22 - 23	6440		72
	NM_001301365.1	NP_001288294.1	22 - 23	6877		72
	XM_011544031.1	XP_011542333.1	22 - 23	6440		72
	XM_011544032.1	XP_011542334.1	22 - 23	6843		72
	XM_011544033.2	XP_011542335.1	22 - 23	6590		72
	XM_011544034.1	XP_011542336.1	21 - 22	6302		72
	XM_011544035.2	XP_011542337.1	22 - 23	6440		72
	XM_011544036.2	XP_011542338.1	18 - 19	4094		72
	XM_011544037.2	XP_011542339.1	22 - 23	6440		72
	XM_011544039.2	XP_011542341.1	22 - 23	6440		72
	XM_017000150.1	XP_016855639.1	22 - 23	6440		72
GenBank mRNA	BC144702.1	-	21 - 22	6314		72
	U67615.1	-	22 - 23	6447		72
	U70064.1	-	22 - 23	6650		72

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100017836.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003996.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene LYST

Gene Ontology Categories:

Process(es)

lysosome organization
protein transport
leukocyte chemotaxis
melanosome organization
endosome to lysosome transport via multivesicular body sorting pathway
mast cell secretory granule organization
natural killer cell mediated cytotoxicity
defense response to bacterium
defense response to protozoan
pigmentation
defense response to virus

Function(s)

protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01060535.hg.1	TC01003996.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01060535.hg.1	ENST00000389793.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01060535.hg.1	ENST00000389794.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01060535.hg.1	ENST00000536965.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01060535.hg.1	NM_000081.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	ENST00000389793.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	ENST00000389794.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	ENST00000489585.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	NM_000081.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	NM_001301365.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	ENST00000389793.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	ENST00000389794.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	ENST00000489585.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	NM_000081.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	NM_001301365.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100234608.hg.1	TC0100017836.hg.1	Clariom D TC