Hs00918105_g1

• Gene Symbol: OBSCN
• Gene Name: obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
• Gene Aliases: ARHGEF30, UNC89
• Chromosome Location: Chr.1: 228208013 - 228381431 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: OBSCN
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001098623.2	NP_001092093.2	93 - 94	20320		57
	NM_001271223.2	NP_001258152.2	104 - 105	23191		57
	XM_005273287.4	XP_005273344.1	105 - 106	23577		57
	XM_005273291.4	XP_005273348.1	105 - 106	23541		57
	XM_005273298.4	XP_005273355.1	104 - 105	23268		57
	XM_005273307.4	XP_005273364.1	100 - 101	22455		57
	XM_006711822.3	XP_006711885.1	103 - 104	23001		57
	XM_006711823.3	XP_006711886.1	103 - 104	22995		57
	XM_011544297.2	XP_011542599.1	97 - 98	21411		57
	XM_011544299.2	XP_011542601.1	96 - 97	21135		57
	XM_017002443.1	XP_016857932.1	105 - 106	23622		57
	XM_017002444.1	XP_016857933.1	105 - 106	23585		57
	XM_017002445.1	XP_016857934.1	105 - 106	23619		57
	XM_017002446.1	XP_016857935.1	105 - 106	23619		57
	XM_017002447.1	XP_016857936.1	105 - 106	23619		57
	XM_017002448.1	XP_016857937.1	105 - 106	23472		57
	XM_017002449.1	XP_016857938.1	104 - 105	23359		57
	XM_017002450.1	XP_016857939.1	104 - 105	23359		57
	XM_017002451.1	XP_016857940.1	104 - 105	23359		57
	XM_017002452.1	XP_016857941.1	104 - 105	23359		57
	XM_017002453.1	XP_016857942.1	104 - 105	23346		57
	XM_017002454.1	XP_016857943.1	104 - 105	23346		57
	XM_017002455.1	XP_016857944.1	104 - 105	23346		57
	XM_017002456.1	XP_016857945.1	104 - 105	23346		57
	XM_017002457.1	XP_016857946.1	104 - 105	23346		57
	XM_017002458.1	XP_016857947.1	103 - 104	23095		57
	XM_017002459.1	XP_016857948.1	103 - 104	23095		57
	XM_017002460.1	XP_016857949.1	103 - 104	23095		57
	XM_017002461.1	XP_016857950.1	103 - 104	23082		57
	XM_017002462.1	XP_016857951.1	103 - 104	23070		57
	XM_017002463.1	XP_016857952.1	103 - 104	23049		57
	XM_017002464.1	XP_016857953.1	103 - 104	22998		57
	XM_017002465.1	XP_016857954.1	102 - 103	22831		57
	XM_017002466.1	XP_016857955.1	102 - 103	22831		57
	XM_017002467.1	XP_016857956.1	102 - 103	22831		57
	XM_017002468.1	XP_016857957.1	101 - 102	22567		57
	XM_017002469.1	XP_016857958.1	99 - 100	22039		57
	XM_017002470.1	XP_016857959.1	94 - 95	20720		57
GenBank mRNA	AB046859.2	-	33 - 34	4095		57
	AM231061.1	-	19 - 20	2222		57
	DQ400343.1	-	19 - 20	2222		57

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100011861.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001888.hg.1

• Set Membership: Amplicon length less than or equal to 70, Detect Genomic DNA, Homo sapiens, Probe spans exons

Panther Classification:

Molecular Function -

immunoglobulin

Gene Ontology Categories:

Process(es)

protein phosphorylation
multicellular organism development
regulation of Rho protein signal transduction
protein localization to M-band
positive regulation of apoptotic process
positive regulation of GTPase activity
sarcomere organization
regulation of small GTPase mediated signal transduction
mitophagy in response to mitochondrial depolarization

Function(s)

protein serine/threonine kinase activity
guanyl-nucleotide exchange factor activity
Rho guanyl-nucleotide exchange factor activity
protein binding
calmodulin binding
ATP binding
structural constituent of muscle
ankyrin binding
titin binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01029492.hg.1	TC01001888.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01029492.hg.1	ENST00000366707.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029492.hg.1	ENST00000422127.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01029492.hg.1	NM_001098623.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	ENST00000366707.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	ENST00000422127.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	ENST00000570156.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	NM_001098623.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	NM_001271223.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	ENST00000366707.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	ENST00000422127.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	ENST00000570156.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	NM_001098623.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	NM_001271223.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100187654.hg.1	TC0100011861.hg.1	Clariom D TC