Hs00922243_m1

• Gene Symbol: CXCL13
• Gene Name: C-X-C motif chemokine ligand 13
• Gene Aliases: ANGIE, ANGIE2, BCA-1, BCA1, BLC, BLR1L, SCYB13
• Chromosome Location: Chr.4: 77511753 - 77611834 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CXCL13
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006419.2	NP_006410.1	2 - 3	138		95
	XM_006714063.3	XP_006714126.1	1 - 2	131		95
GenBank mRNA	AF029894.1	-	1 - 2	94		95
	AF044197.1	-	2 - 3	150		95
	AJ002211.1	-	1 - 2	94		95
	BC012589.1	-	1 - 2	110	4246053	95
	CR407624.1	-	1 - 2	60		95

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0400007918.hg.1
This assay targets the same location as HTA transcript cluster(s) TC04000432.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CXCL13

Gene Ontology Categories:

Process(es)

germinal center formation
lymphocyte chemotaxis across high endothelial venule
chronic inflammatory response
regulation of humoral immune response
inflammatory response
immune response
cell surface receptor signaling pathway
G protein-coupled receptor signaling pathway
positive regulation of cytosolic calcium ion concentration
cell-cell signaling
positive regulation of T cell chemotaxis
response to lipopolysaccharide
positive regulation of integrin activation
positive regulation of cell-cell adhesion mediated by integrin
B cell chemotaxis
endothelial cell chemotaxis to fibroblast growth factor
B cell chemotaxis across high endothelial venule
regulation of cell population proliferation
defense response to bacterium
regulation of angiogenesis
lymph node development
chemokine-mediated signaling pathway
activation of GTPase activity
negative regulation of endothelial cell chemotaxis to fibroblast growth factor

Function(s)

chemokine activity
heparin binding
fibroblast growth factor binding
CXCR5 chemokine receptor binding
CCR10 chemokine receptor binding
protein heterodimerization activity
receptor ligand activity
CXCR3 chemokine receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR04006122.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04006122.hg.1	NM_006419.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR04006122.hg.1	TC04000432.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR04006119.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04006119.hg.1	NM_006419.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR04006119.hg.1	TC04000432.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR04006123.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04006123.hg.1	NM_006419.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR04006123.hg.1	TC04000432.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	PSR0400154384.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154384.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154384.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	PSR0400154384.hg.1	TC0400007918.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400154384.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154384.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154384.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	PSR0400154382.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154382.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154382.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	PSR0400154382.hg.1	TC0400007918.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400154382.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154382.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154382.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	PSR0400154383.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154383.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154383.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	PSR0400154383.hg.1	TC0400007918.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400154383.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154383.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154383.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	ENST00000506590.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	TC0400007918.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	PSR0400154379.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154379.hg.1	NM_006419.2	Refseq
Affymetrix Human Clariom D Assay	PSR0400154379.hg.1	TC0400007918.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400154379.hg.1	ENST00000286758.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0400154379.hg.1	NM_006419.2	Refseq